RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 DNAI1Q9UI46 699 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SCAF8Q9UPN6 1271 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 GPR52Q9Y2T5 361 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PNPLA7Q6ZV29 1317 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ARHGEF17Q96PE2 2063 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 OR14I1A6ND48 311 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 EFCAB8A8MWE9 144 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 NT5C1B-RDH14C9J2C7 533 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SPTLC2O15270 562 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 TFRCP02786 760 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PRKCBP05771 671 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PDIA3P30101 505 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PPIFP30405 207 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 LIMS1P48059 325 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ITGA1P56199 1179 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ADAM8P78325 824 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 HTRA4P83105 476 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ADCY2Q08462 1091 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MALLQ13021 153 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PMS2P11Q13670 270 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF792Q3KQV3 632 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PABPC1LQ4VXU2 614 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ALFQ53S48 1182 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 INO80DQ53TQ3 878 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF385BQ569K4 471 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DENND2CQ68D51 928 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 BICRALQ6AI39 1079 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 Q6ZUG5 572 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ANKRD18AQ8IVF6 992 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 IGDCC3Q8IVU1 814 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MBD3L2Q8NHZ7 208 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 NUP133Q8WUM0 1156 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZCCHC14Q8WYQ9 949 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SCAMP4Q969E2 229 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 COQ10AQ96MF6 247 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 P2RX7Q99572 595 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MRPL1Q9BYD6 325 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SEMA4CQ9C0C4 833 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 KATNBL1Q9H079 304 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 GCM1Q9NP62 436 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 WASH6PQ9NQA3 447 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 HELLSQ9NRZ9 838 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 KCND1Q9NSA2 647 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 POLR3BQ9NW08 1133 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SEMA5BQ9P283 1151 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 USP25Q9UHP3 1055 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CAPN8A6NHC0 703 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 AQP7P3A6NL99 342 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 H0Y858 1186 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 SYT5O00445 386 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 DAPK3O43293 454 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PAX4O43316 350 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 CTNND1O60716 968 aaKnown RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 KLHL18O94889 574 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF888P0CJ79 500 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 KITP10721 976 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 JUPP14923 745 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 NPR1P16066 1061 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PTGS1P23219 599 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 GLRBP48167 497 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 NKX3-2P78367 333 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 CYP4F8P98187 520 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PPARAQ07869 468 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 NBPF8Q3BBV2 869 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ANKS6Q68DC2 871 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 CCDC174Q6PII3 467 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 LVRNQ6Q4G3 990 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 BEND5Q7L4P6 421 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 FAM129CQ86XR2 697 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 SH2D3CQ8N5H7 860 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ENAHQ8N8S7 591 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 MARCH10Q8NA82 808 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 FANCBQ8NB91 859 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 OR7D4Q8NG98 312 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 MAGEC3Q8TD91 643 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF480Q8WV37 535 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 GAB3Q8WWW8 586 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 INTS4Q96HW7 963 aaKnown RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF518BQ9C0D4 1074 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 MARCH4Q9P2E8 410 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 SWAP70Q9UH65 585 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 GPR160Q9UJ42 338 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PNMA2Q9UL42 364 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 AGAP1Q9UPQ3 857 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PLEKHM1Q9Y4G2 1056 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PCDHGB2Q9Y5G2 931 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 A0A0G2JNJ9 132 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PRSS47A8MTI9 375 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 MATN2O00339 956 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 TLR5O60602 858 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PLA2G6O60733 806 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 INHBBP09529 407 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 FAM163BP0C2L3 166 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PEPDP12955 493 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF28P17035 718 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 HDCP19113 662 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 HTR1BP28222 390 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms