RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PHLDB3Q6NSJ2 640 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CNKSR3Q6P9H4 555 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 GJB7Q6PEY0 223 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ALKAL1Q6UXT8 129 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ARHGEF19Q8IW93 802 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 C1orf127Q8N9H9 656 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 DBF4BQ8NFT6 615 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 RSPH1Q8WYR4 309 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 SCLYQ96I15 445 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ZNF830Q96NB3 372 aaPredicted RBP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 WNT8AQ9H1J5 351 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ELAC1Q9H777 363 aaKnown RBP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 TMEM161AQ9NX61 479 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 AGAP1Q9UPQ3 857 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ARL5CA6NH57 179 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 C9IYK1 514 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 KIAA0355O15063 1070 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 TIMP1P01033 207 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 PFKMP08237 780 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 JAM2P57087 298 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 ARID5AQ03989 594 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 KLHL30Q0D2K2 578 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 GRIK3Q13003 919 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 CUL2Q13617 745 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 MEA1Q16626 185 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 DEFB128Q7Z7B8 93 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 RPUSD2Q8IZ73 545 aaKnown RBP16.55■□□□□ 0.24
VAMP1-207ENST00000539047 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 LRRC52Q8N7C0 313 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 LPPQ93052 612 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 FAM84AQ96KN4 292 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 GAD1Q99259 594 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 KCNF1Q9H3M0 494 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 AIPL1Q9NZN9 384 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 TUBGCP4Q9UGJ1 667 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
VAMP1-207ENST00000539047 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 MEFVO15553 781 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-207ENST00000539047 EFCAB14O75071 495 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 LRRN2O75325 713 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 GFPT2O94808 682 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 STAU1O95793 577 aaKnown RBP16.54■□□□□ 0.24
VAMP1-207ENST00000539047 KRT5P13647 590 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 FECHP22830 423 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 KCNJ6P48051 423 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 IKBKEQ14164 716 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 SV2CQ496J9 727 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 CCDC170Q8IYT3 715 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 TXLNBQ8N3L3 684 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 HELQQ8TDG4 1101 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 ZFP42Q96MM3 310 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 ZMAT2Q96NC0 199 aaKnown RBP16.54■□□□□ 0.24
VAMP1-207ENST00000539047 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
VAMP1-207ENST00000539047 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
VAMP1-207ENST00000539047 KANSL3Q9P2N6 904 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 SIX4Q9UIU6 781 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 INPP5FQ9Y2H2 1132 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 ALPK3Q96L96 1907 aa16.54■□□□□ 0.24
VAMP1-207ENST00000539047 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-207ENST00000539047 AKR1B10O60218 316 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 ANXA13P27216 316 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 PDE6CP51160 858 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 SCNN1GP51170 649 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 BPIFB4P59827 614 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 SPOPLQ6IQ16 392 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 DPY19L2P1Q6NXN4 242 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 ZNF598Q86UK7 904 aaKnown RBP16.53■□□□□ 0.24
VAMP1-207ENST00000539047 SHC3Q92529 594 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 TATDN2Q93075 761 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-207ENST00000539047 UROC1Q96N76 676 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 FAM193BQ96PV7 902 aaPredicted RBP16.53■□□□□ 0.24
VAMP1-207ENST00000539047 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
VAMP1-207ENST00000539047 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
VAMP1-207ENST00000539047 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
VAMP1-207ENST00000539047 SSU72P8A0A1W2PR75 194 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 PTGESO14684 152 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 CST3P01034 146 aaPredicted RBP16.52■□□□□ 0.24
VAMP1-207ENST00000539047 PAX3P23760 479 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 RPL9P32969 192 aaKnown RBP16.52■□□□□ 0.24
VAMP1-207ENST00000539047 TAF6P49848 677 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 GUCY2FP51841 1108 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 FAM189BP81408 668 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 RNASELQ05823 741 aaKnown RBP16.52■□□□□ 0.24
VAMP1-207ENST00000539047 SPA17Q15506 151 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 WDR72Q3MJ13 1102 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 C9orf57Q5W0N0 161 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 MFSD5Q6N075 450 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 SCARA5Q6ZMJ2 495 aa16.52■□□□□ 0.24
VAMP1-207ENST00000539047 NPAS4Q8IUM7 802 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms