RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PKNOX2Q96KN3 472 aa12.19□□□□□ -0.46
SLC28A1-204ENST00000538177 SPATA33Q96N06 139 aa12.19□□□□□ -0.46
SLC28A1-204ENST00000538177 TCHPQ9BT92 498 aa12.19□□□□□ -0.46
SLC28A1-204ENST00000538177 TRIM7Q9C029 511 aa12.19□□□□□ -0.46
SLC28A1-204ENST00000538177 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
SLC28A1-204ENST00000538177 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
SLC28A1-204ENST00000538177 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 CFHP08603 1231 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 PROZP22891 400 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 ZNF844Q08AG5 666 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 PTP4A2Q12974 167 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 CCDC137Q6PK04 289 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 ZDHHC24Q6UX98 284 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 ZBTB33Q86T24 672 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 LRRC71Q8N4P6 559 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 SHCBP1Q8NEM2 672 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 IMPG2Q9BZV3 1241 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 SMARCAD1Q9H4L7 1026 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 GRHL1Q9NZI5 618 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 SNX24Q9Y343 169 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 GOLGA6L10A6NI86 522 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 PROSCO94903 275 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 ERLIN2O94905 339 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 MYZAPP0CAP1 466 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 SCARA3Q6AZY7 606 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 PLEKHA7Q6IQ23 1121 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 RUFY4Q6ZNE9 571 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 UBLCP1Q8WVY7 318 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 FZD8Q9H461 694 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
SLC28A1-204ENST00000538177 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 UTRNP46939 3433 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 ACKR2O00590 384 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 EIF3HO15372 352 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 HBP1O60381 514 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 RPL21P46778 160 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 MAMLD1Q13495 774 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 TFDP1Q14186 410 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 OR2W6PQ8NHA6 318 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 MAIP1Q8WWC4 291 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 COPS5Q92905 334 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 C11orf70Q9BRQ4 267 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 PARP2Q9UGN5 583 aa12.17□□□□□ -0.46
SLC28A1-204ENST00000538177 ASB14A6NK59 587 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 ASAP2O43150 1006 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 THAP12O43422 761 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 TXNP10599 105 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 NR1D1P20393 614 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 PLTPP55058 493 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 MYL6P60660 151 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 GNGT1P63211 74 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 LLGL2Q6P1M3 1020 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 MPZL3Q6UWV2 235 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 PHLDB2Q86SQ0 1253 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 CCDC105Q8IYK2 499 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 ZNF606Q8WXB4 792 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 MTMR12Q9C0I1 747 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 SCINQ9Y6U3 715 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 B4GALT4O60513 344 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 HOXC6P09630 235 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 EIF3BP55884 814 aaKnown RBP12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 C2CD6Q53TS8 623 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 LDLRAD1Q5T700 205 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 FOXR1Q6PIV2 292 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 PASD1Q8IV76 773 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 TRAPPC12Q8WVT3 735 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 NIF3L1Q9GZT8 377 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 EPB41L4BQ9H329 900 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 PDGFCQ9NRA1 345 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 ATP8A1Q9Y2Q0 1164 aa12.16□□□□□ -0.46
SLC28A1-204ENST00000538177 PSTPIP1O43586 416 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 LSM8O95777 96 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 MMP8P22894 467 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 EPHX2P34913 555 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 GJA5P36382 358 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 TMEM63BQ5T3F8 832 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms