RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 RTN2O75298 545 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 GJB1P08034 283 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 TNNI1P19237 187 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 SLC26A2P50443 739 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 EFNA5P52803 228 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 HADHBP55084 474 aaKnown RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 CCNA1P78396 465 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 PEX26Q7Z412 305 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 RNF149Q8NC42 400 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 OR5B17Q8NGF7 314 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 TAF4BQ92750 862 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 PBKQ96KB5 322 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 FNBP1Q96RU3 617 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 CGRRF1Q99675 332 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 PTPN18Q99952 460 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 APOBEC3GQ9HC16 384 aaKnown RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 EPB41L5Q9HCM4 733 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 MCM3APO60318 1980 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 OPA1O60313 960 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 HSF2BPO75031 334 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 GZMAP12544 262 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 TNFSF9P41273 254 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 CDR2Q01850 454 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 GUCY1A3Q02108 690 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 GUCY2DQ02846 1103 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 NNTQ13423 1086 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 MXD4Q14582 209 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 SPOPLQ6IQ16 392 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 EMBQ6PCB8 327 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 ENOSF1Q7L5Y1 443 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 SYCE1Q8N0S2 351 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 ABRAQ8N0Z2 381 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 USP38Q8NB14 1042 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 CAVIN3Q969G5 261 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 RUFY1Q96T51 708 aa11.5□□□□□ -0.57
CLIP1-210ENST00000538120 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 NDUFAB1O14561 156 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 HBP1O60381 514 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 SNAI1O95863 264 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 PRKCBP05771 671 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 HARSP12081 509 aaKnown RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 ACO1P21399 889 aaKnown RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 GPC5P78333 572 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 PIK3R5Q8WYR1 880 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 ZNF668Q96K58 619 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 GBA2Q9HCG7 927 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 PTPRHQ9HD43 1115 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 GPR37O15354 613 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 CLDN3O15551 220 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 TOM1L1O75674 476 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 HEXIM1O94992 359 aaKnown RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 C22orf31O95567 290 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 PROZP22891 400 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 CLCN3P51790 818 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 FKBP1BP68106 108 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 SKOR1P84550 965 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 SPRYD7Q5W111 196 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 EFCAB12Q6NXP0 572 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 RHPN2Q8IUC4 686 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 RHOT2Q8IXI1 618 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 IQCKQ8N0W5 287 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 FZD8Q9H461 694 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 VTA1Q9NP79 307 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 CHORDC1Q9UHD1 332 aaPredicted RBP11.49□□□□□ -0.57
CLIP1-210ENST00000538120 AMFRQ9UKV5 643 aa11.49□□□□□ -0.57
CLIP1-210ENST00000538120 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-210ENST00000538120 STRNO43815 780 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 CEP104O60308 925 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 LGALS2P05162 132 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 PIK3CAP42336 1068 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 MCL1Q07820 350 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 C6orf132Q5T0Z8 1188 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 ZBTB8OSQ8IWT0 167 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 C1orf112Q9NSG2 853 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 ERAP1Q9NZ08 941 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 B4GALT5O43286 388 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 MTA2O94776 668 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 GH1P01241 217 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 CYP1A2P05177 515 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 KRT5P13647 590 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 INSRRP14616 1297 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 HNRNPH1P31943 449 aaKnown RBP11.48□□□□□ -0.57
CLIP1-210ENST00000538120 PDE6CP51160 858 aa11.48□□□□□ -0.57
CLIP1-210ENST00000538120 BIRC3Q13489 604 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms