RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 DUSP6Q16828 381 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 SLC35G1Q2M3R5 365 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ZNF484Q5JVG2 852 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 MEI1Q5TIA1 1274 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 MCTP2Q6DN12 878 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 LRFN4Q6PJG9 635 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 MTHFD1LQ6UB35 978 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 SYNE3Q6ZMZ3 975 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ADGRD2Q7Z7M1 963 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ZNF654Q8IZM8 581 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ABI1Q8IZP0 508 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 COLGALT1Q8NBJ5 622 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 TMEM87AQ8NBN3 555 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 SUSD6Q92537 303 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 CASP10Q92851 521 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ELMO3Q96BJ8 720 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 RIPOR3Q96MK2 946 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 NECTIN4Q96NY8 510 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ADAM2Q99965 735 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 MXRA8Q9BRK3 442 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ATP6V0A4Q9HBG4 840 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 RGS18Q9NS28 235 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 KCNH7Q9NS40 1196 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 TMEM161AQ9NX61 479 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 BARX2Q9UMQ3 279 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-207ENST00000537965 PCDHA6Q9UN73 950 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 PCDHA8Q9Y5H6 950 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 CACNA1IQ9P0X4 2223 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 RALGAPA1Q6GYQ0 2036 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 WDR87Q6ZQQ6 2873 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 DOCK8Q8NF50 2099 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TDRD15B5MCY1 1934 aaKnown RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TBKBP1A7MCY6 615 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 C9IYK1 514 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 PROB1E7EW31 1015 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 PER2O15055 1255 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 MAGEB2O15479 319 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 GLP2RO95838 553 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ZSCAN20P17040 1043 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TMOD1P28289 359 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ZNF76P36508 570 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TECP42680 631 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 LIFRP42702 1097 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 MTHFRP42898 656 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 CRYBB1P53674 252 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ACTR2P61160 394 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TCF15Q12870 199 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 GIT2Q14161 759 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 PLCB4Q15147 1175 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ANKRD54Q6NXT1 300 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 MIS18BP1Q6P0N0 1132 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 AGMOQ6ZNB7 445 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 NIPA1Q7RTP0 329 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 HDXQ7Z353 690 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ZNF713Q8N859 430 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 KCT2Q8NC54 265 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ZNF507Q8TCN5 953 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 LINC01599Q8WXQ3 324 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 MRPS27Q92552 414 aaKnown RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ASIC4Q96FT7 647 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TMEM117Q9H0C3 514 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ERVK-5Q9HDB9 667 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 ENTPD7Q9NQZ7 604 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 TYW1Q9NV66 732 aaKnown RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 SPG21Q9NZD8 308 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 STK39Q9UEW8 545 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 CEP131Q9UPN4 1083 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 SORCS3Q9UPU3 1222 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 GINS2Q9Y248 185 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 SUPT16HQ9Y5B9 1047 aaKnown RBP6.03□□□□□ -1.44
SNHG1-207ENST00000537965 SLC12A7Q9Y666 1083 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 C2orf16Q68DN1 1984 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 USP34Q70CQ2 3546 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 MIA3Q5JRA6 1907 aa6.03□□□□□ -1.44
SNHG1-207ENST00000537965 EOMESO95936 686 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 CHMLP26374 656 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 ALDH7A1P49419 539 aaKnown RBP6.02□□□□□ -1.45
SNHG1-207ENST00000537965 LIG3P49916 1009 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 CLCN5P51795 746 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 ERVFC1P60507 584 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 FAM189BP81408 668 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 CDC42EP1Q00587 391 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 TAGLNQ01995 201 aaKnown RBP6.02□□□□□ -1.45
SNHG1-207ENST00000537965 TMEM62Q0P6H9 643 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 SMC1AQ14683 1233 aaKnown RBP6.02□□□□□ -1.45
SNHG1-207ENST00000537965 TMEM266Q2M3C6 531 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 CEP55Q53EZ4 464 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 ATAT1Q5SQI0 421 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 TTC22Q5TAA0 569 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 KCNT2Q6UVM3 1135 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-207ENST00000537965 ERMP1Q7Z2K6 904 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 UBE3DQ7Z6J8 389 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 CKAP2LQ8IYA6 745 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 MB21D2Q8IYB1 491 aaPredicted RBP6.02□□□□□ -1.45
SNHG1-207ENST00000537965 KIAA0319LQ8IZA0 1049 aa6.02□□□□□ -1.45
SNHG1-207ENST00000537965 SRBD1Q8N5C6 995 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms