RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 NDC80O14777 642 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ZC3H11AO75152 810 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CALRP27797 417 aaKnown RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 FOXN2P32314 431 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 RARRES1P49788 294 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 GRIK3Q13003 919 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TNIP1Q15025 636 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TMED2Q15363 201 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 NIPA1Q7RTP0 329 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 HAUS6Q7Z4H7 955 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 USP37Q86T82 979 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TRABD2AQ86V40 505 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 MXRA8Q9BRK3 442 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TMEM39BQ9GZU3 492 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 MYLK2Q9H1R3 596 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 RASA4BC9J798 803 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 RASA4O43374 803 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 HNRNPCL1O60812 293 aaKnown RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 PROSCO94903 275 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 ASNSP08243 561 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 UNGP13051 313 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 DPEP1P16444 411 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 KCNA3P22001 575 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 RRM1P23921 792 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 ALDH3A1P30838 453 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 RASSF2P50749 326 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 WDR4P57081 412 aaKnown RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 MAP3K10Q02779 954 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 MOGSQ13724 837 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 RASA2Q15283 850 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 WASHC2DQ5SRD0 308 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 VSIG1Q86XK7 387 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 APLFQ8IW19 511 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 MCOLN2Q8IZK6 566 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 FBXL13Q8NEE6 735 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 UTP4Q969X6 686 aaKnown RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 ZBED3Q96IU2 234 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-218ENST00000537641 HERPUD2Q9BSE4 406 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 RNPEPL1Q9HAU8 725 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 CYP39A1Q9NYL5 469 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
CPSF7-218ENST00000537641 GNAZP19086 355 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 MAGEA4P43358 317 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 SATB1Q01826 763 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 GCNT1Q02742 428 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 TAF11Q15544 211 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 TRIP13Q15645 432 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-218ENST00000537641 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
CPSF7-218ENST00000537641 PDK4Q16654 411 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 CAPRIN2Q6IMN6 1127 aaKnown RBP12.89□□□□□ -0.35
CPSF7-218ENST00000537641 RHOT1Q8IXI2 618 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 KATNAL2Q8IYT4 538 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 KIRREL3Q8IZU9 778 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 ENDOVQ8N8Q3 282 aaKnown RBP12.89□□□□□ -0.35
CPSF7-218ENST00000537641 ZNF398Q8TD17 642 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 DENND1AQ8TEH3 1009 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 PARD3BQ8TEW8 1205 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
CPSF7-218ENST00000537641 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 TBK1Q9UHD2 729 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 PHTF1Q9UMS5 762 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 TRIM33Q9UPN9 1127 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 NFASCO94856 1347 aa12.89□□□□□ -0.35
CPSF7-218ENST00000537641 GSTTP1A0A1W2PQM5 241 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 DNALI1O14645 258 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 EDF1O60869 148 aaKnown RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 PEX11AO75192 247 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 CALB2P22676 271 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 KLRC2P26717 231 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ADSSP30520 456 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 TMEM63BQ5T3F8 832 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 MIS18BP1Q6P0N0 1132 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 MAP4K3Q8IVH8 894 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ARMC2Q8NEN0 867 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ERP27Q96DN0 273 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 NAF1Q96HR8 494 aaKnown RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 C9orf72Q96LT7 481 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 SSU72Q9NP77 194 aaKnown RBP12.88□□□□□ -0.35
CPSF7-218ENST00000537641 ACP6Q9NPH0 428 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 CHKBQ9Y259 395 aa12.88□□□□□ -0.35
CPSF7-218ENST00000537641 R3HDM2Q9Y2K5 976 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms