RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PODXLO00592 558 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 PPEF2O14830 753 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 ZC3H11AO75152 810 aaKnown RBP eCLIP26.12■■□□□ 1.77
HMGA2-208ENST00000537429 LRRN2O75325 713 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 PIK3CAP42336 1068 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 TRPC3Q13507 836 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 GSE1Q14687 1217 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 LRRC52Q8N7C0 313 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 LMO3Q8TAP4 145 aa26.12■■□□□ 1.77
HMGA2-208ENST00000537429 XPO4Q9C0E2 1151 aaKnown RBP26.12■■□□□ 1.77
HMGA2-208ENST00000537429 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.11■■□□□ 1.77
HMGA2-208ENST00000537429 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.11■■□□□ 1.77
HMGA2-208ENST00000537429 ALDH2P05091 517 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 MYL6P60660 151 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 KCNMA1Q12791 1236 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 EXOC3L4Q17RC7 722 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 GBP6Q6ZN66 633 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 FIBCD1Q8N539 461 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 RABGGTAQ92696 567 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 CRACR2AQ9BSW2 395 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 XYLT2Q9H1B5 865 aa26.11■■□□□ 1.77
HMGA2-208ENST00000537429 LCHNA4D1U4 455 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 NRP1O14786 923 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 GALTP07902 379 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 IGFBP6P24592 240 aaPredicted RBP26.1■■□□□ 1.77
HMGA2-208ENST00000537429 OR1G1P47890 313 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 SLC11A1P49279 550 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 BCAR1P56945 870 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 DCLRE1AQ6PJP8 1040 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 EHBP1Q8NDI1 1231 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 C3orf58Q8NDZ4 430 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 ERGIC2Q96RQ1 377 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 GRPEL1Q9HAV7 217 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 GCNT4Q9P109 453 aa26.1■■□□□ 1.77
HMGA2-208ENST00000537429 R3HCC1Q9Y3T6 440 aaKnown RBP26.1■■□□□ 1.77
HMGA2-208ENST00000537429 CBFA2T2O43439 604 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 STAU1O95793 577 aaKnown RBP26.09■■□□□ 1.77
HMGA2-208ENST00000537429 ASS1P00966 412 aaKnown RBP26.09■■□□□ 1.77
HMGA2-208ENST00000537429 LINC00271P0C7V0 271 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 ATICP31939 592 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 SGSM1Q2NKQ1 1148 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 CLP1Q92989 425 aaKnown RBP26.09■■□□□ 1.77
HMGA2-208ENST00000537429 VRTNQ9H8Y1 702 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 FAN1Q9Y2M0 1017 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 SCN1AP35498 2009 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 TMEM189-UBE2V1I3L0A0 370 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 B3GAT3O94766 335 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 SLC9A1P19634 815 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 PON1P27169 355 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 PNPLA4P41247 253 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 CD300LGQ6UXG3 332 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 HPDLQ96IR7 371 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 PI4K2AQ9BTU6 479 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 TRIM5Q9C035 493 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 PCDHA11Q9Y5I1 949 aa26.09■■□□□ 1.77
HMGA2-208ENST00000537429 GBF1Q92538 1859 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 MYOGP15173 224 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 LAG3P18627 525 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 PBX3P40426 434 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 ALDH7A1P49419 539 aaKnown RBP26.08■■□□□ 1.77
HMGA2-208ENST00000537429 LILRA4P59901 499 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 TRIM65Q6PJ69 517 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 KCNT2Q6UVM3 1135 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 TAF4BQ92750 862 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 ZNF560Q96MR9 790 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 INTS2Q9H0H0 1204 aaKnown RBP26.08■■□□□ 1.77
HMGA2-208ENST00000537429 SIK3Q9Y2K2 1263 aa26.08■■□□□ 1.77
HMGA2-208ENST00000537429 PRG3Q9Y2Y8 225 aaPredicted RBP26.08■■□□□ 1.77
HMGA2-208ENST00000537429 LAMA3Q16787 3333 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 A0A1W2PQC6 194 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 F8W810 466 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 SPTLC1O15269 473 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 CLSTN1O94985 981 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 KIF4AO95239 1232 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 TPM3P06753 285 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 TAF6P49848 677 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 MYO1EQ12965 1108 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 SYCP1Q15431 976 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 ZNF699Q32M78 642 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 ELMO3Q96BJ8 720 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 COLEC11Q9BWP8 271 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 IMPG2Q9BZV3 1241 aa26.07■■□□□ 1.76
HMGA2-208ENST00000537429 KIAA1671Q9BY89 1806 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 CARNS1A5YM72 827 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 NT5C1B-RDH14C9J2C7 533 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 ITGB1P05556 798 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 PBX1P40424 430 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 AARSP49588 968 aaKnown RBP eCLIP26.06■■□□□ 1.76
HMGA2-208ENST00000537429 PTPN21Q16825 1174 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 SV2CQ496J9 727 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 SPOPLQ6IQ16 392 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 DPY19L2P1Q6NXN4 242 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 COLGALT1Q8NBJ5 622 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 CCDC150Q8NCX0 1101 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 ZNF558Q96NG5 402 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 APOBEC3GQ9HC16 384 aaKnown RBP26.06■■□□□ 1.76
HMGA2-208ENST00000537429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.06■■□□□ 1.76
HMGA2-208ENST00000537429 MARCH5Q9NX47 278 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 MSRAQ9UJ68 235 aa26.06■■□□□ 1.76
HMGA2-208ENST00000537429 COLQQ9Y215 455 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms