RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NUP93Q8N1F7 819 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 SCAIQ8N9R8 606 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 CCT7Q99832 543 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 GREM2Q9H772 168 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 SIK3Q9Y2K2 1263 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ADAMTS13Q76LX8 1427 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ITGA2BP08514 1039 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ACTN1P12814 892 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ARL4CP56559 192 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 STX1BP61266 288 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 KLHL38Q2WGJ6 581 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 DARS2Q6PI48 645 aaKnown RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 AZIN2Q96A70 460 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 NT5C1BQ96P26 610 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 NUP85Q9BW27 656 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ABCF3Q9NUQ8 709 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 NMRK1Q9NWW6 199 aa5.69□□□□□ -1.5
PTPRD-213ENST00000537002 BARX2Q9UMQ3 279 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-213ENST00000537002 ADGRA3Q8IWK6 1321 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 MLH1P40692 756 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SMAD1Q15797 465 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TAF1BQ53T94 588 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF564Q8TBZ8 553 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 NSL1Q96IY1 281 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 FAM118BQ9BPY3 351 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SYT15Q9BQS2 421 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TSSK1BQ9BXA7 367 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 GLT8D2Q9H1C3 349 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ZC4H2Q9NQZ6 224 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PADI4Q9UM07 663 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 FADS3Q9Y5Q0 445 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TOPAZ1Q8N9V7 1692 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SOCS7O14512 581 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 GNGT2O14610 69 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ECE1P42892 770 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CTSWP56202 376 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 UBE2SQ16763 222 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ISLR2Q6UXK2 745 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 IRF2BP1Q8IU81 584 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ATP11CQ8NB49 1132 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SLCO2A1Q92959 643 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 INTS2Q9H0H0 1204 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TTLL3Q9Y4R7 772 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 USP54Q70EL1 1684 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PI4K2BG5E9Z4 385 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ABL2P42684 1182 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CD97P48960 835 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 DMPKQ09013 629 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SLC27A3Q5K4L6 730 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 DUPD1Q68J44 220 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SPICE1Q8N0Z3 855 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 DAGLBQ8NCG7 672 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 RNF25Q96BH1 459 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CGREF1Q99674 301 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TXLNGYQ9BZA5 131 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 WWP1Q9H0M0 922 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 UBE2Q2LH0YL09 131 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 KRT37O76014 449 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CFBP00751 764 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ASLP04424 464 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 MAP4P27816 1152 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 EPHB2P29323 1055 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 MARSP56192 900 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 GPC5P78333 572 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 C11orf63Q6NUN7 778 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 RWDD4Q6NW29 188 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 C4orf50Q6ZRC1 276 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 FRA10AC1Q70Z53 315 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SLFN12Q8IYM2 578 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 LARGE2Q8N3Y3 721 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SLC35G2Q8TBE7 412 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SLC16A10Q8TF71 515 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 MTMR8Q96EF0 704 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 NRBF2Q96F24 287 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ACAP3Q96P50 834 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SETDB2Q96T68 719 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 BEGAINQ9BUH8 593 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TRIM9Q9C026 710 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 C10orf88Q9H8K7 445 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 C1orf228Q6PIY5 440 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 RAPH1Q70E73 1250 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 NLRP9Q7RTR0 991 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 NET1Q7Z628 596 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SLFN11Q7Z7L1 901 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PDIK1LQ8N165 341 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 GATA6Q92908 595 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 HDAC11Q96DB2 347 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 FAM81BQ96LP2 452 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ZDHHC7Q9NXF8 308 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 FETUBQ9UGM5 382 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TRIM33Q9UPN9 1127 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 BCS1LQ9Y276 419 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 UBE4BO95155 1302 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 GOLGA8TH3BQL2 631 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PEX1O43933 1283 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ZBED4O75132 1171 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PARNO95453 639 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 LYNP07948 512 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms