RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 VN1R2Q8NFZ6 395 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 PLEKHA5Q9HAU0 1116 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 FAN1Q9Y2M0 1017 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 RWDD3Q9Y3V2 267 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 PCDHB12Q9Y5F1 795 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 DENND4AQ7Z401 1863 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 CFAP54Q96N23 3096 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 C5orf42Q9H799 3197 aa14.2□□□□□ -0.14
CHFR-210ENST00000535527 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 TMEM189-UBE2V1I3L0A0 370 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 LILRB3O75022 631 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 CCNE1P24864 410 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 TMEM132DQ14C87 1099 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 PSMD6Q15008 389 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 PTPN14Q15678 1187 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 SMAD2Q15796 467 aaKnown RBP14.19□□□□□ -0.14
CHFR-210ENST00000535527 TCEAL5Q5H9L2 206 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 C9orf57Q5W0N0 161 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 C11orf57Q6ZUT1 292 aaPredicted RBP14.19□□□□□ -0.14
CHFR-210ENST00000535527 DDX53Q86TM3 631 aaKnown RBP14.19□□□□□ -0.14
CHFR-210ENST00000535527 NELFBQ8WX92 580 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 RSPH1Q8WYR4 309 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 EDAQ92838 391 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 CCDC47Q96A33 483 aaKnown RBP14.19□□□□□ -0.14
CHFR-210ENST00000535527 FAM193BQ96PV7 902 aaPredicted RBP14.19□□□□□ -0.14
CHFR-210ENST00000535527 ASB7Q9H672 318 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 ADAM28Q9UKQ2 775 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 UBQLN1Q9UMX0 589 aaKnown RBP14.19□□□□□ -0.14
CHFR-210ENST00000535527 C2CD2Q9Y426 696 aa14.19□□□□□ -0.14
CHFR-210ENST00000535527 PIRO00625 290 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 LINC01565O15544 149 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 ADAM12O43184 909 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 EXOC3O60645 756 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 GLP2RO95838 553 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
CHFR-210ENST00000535527 PPM1AP35813 382 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 ALDH7A1P49419 539 aaKnown RBP14.18□□□□□ -0.14
CHFR-210ENST00000535527 AARSP49588 968 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHFR-210ENST00000535527 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
CHFR-210ENST00000535527 HYAL1Q12794 435 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 KYAT1Q16773 422 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 CTC1Q2NKJ3 1217 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 PRSS55Q6UWB4 352 aaPredicted RBP14.18□□□□□ -0.14
CHFR-210ENST00000535527 RSPO2Q6UXX9 243 aaPredicted RBP14.18□□□□□ -0.14
CHFR-210ENST00000535527 EP400NLQ6ZTU2 488 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 VPS52Q8N1B4 723 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 CCDC127Q96BQ5 260 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 TMEM169Q96HH4 297 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 CGRRF1Q99675 332 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 TCF25Q9BQ70 676 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 TLR9Q9NR96 1032 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 AAASQ9NRG9 546 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 CLDND1Q9NY35 253 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 LZTS1Q9Y250 596 aa14.18□□□□□ -0.14
CHFR-210ENST00000535527 NOTCH4Q99466 2003 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 C2orf71A6NGG8 1288 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 ZNF233A6NK53 670 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 GOLGA6L22H0YM25 854 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 KIAA0391O15091 583 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 B3GAT3O94766 335 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 IL18RAPO95256 599 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 VNN1O95497 513 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 MBD3O95983 291 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 SOD2P04179 222 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 ALDH2P05091 517 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 ITGB3P05106 788 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 CYP3A5P20815 502 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 LTBRP36941 435 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 MCCD1P59942 119 aaPredicted RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 TFAMQ00059 246 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 POU5F1Q01860 360 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 PPP3CAQ08209 521 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 TDRD10Q5VZ19 366 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 CAVIN1Q6NZI2 390 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 RNF135Q8IUD6 432 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 TRIML1Q8N9V2 468 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 PARD3BQ8TEW8 1205 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 CCDC34Q96HJ3 373 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 PHOX2BQ99453 314 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 IRF2BPLQ9H1B7 796 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 CHST7Q9NS84 486 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 DPP3Q9NY33 737 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 CGNQ9P2M7 1197 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 MUTYHQ9UIF7 546 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
CHFR-210ENST00000535527 DERAQ9Y315 318 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 NME7Q9Y5B8 376 aa14.17□□□□□ -0.14
CHFR-210ENST00000535527 PER2O15055 1255 aa14.16□□□□□ -0.14
CHFR-210ENST00000535527 HCRTO43612 131 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms