RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NUB1Q9Y5A7 615 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 PIRO00625 290 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 TKTP29401 623 aaKnown RBP24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 AARSP49588 968 aaKnown RBP eCLIP24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 TFAMQ00059 246 aaKnown RBP24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 LLGL2Q6P1M3 1020 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 PRSS55Q6UWB4 352 aaPredicted RBP24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 LNX1Q8TBB1 728 aaPredicted RBP24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 MSLNLQ96KJ4 702 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 FAM84AQ96KN4 292 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 GBP4Q96PP9 640 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 ASB2Q96Q27 587 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 LMBRD1Q9NUN5 540 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 FNIP2Q9P278 1114 aa24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 PDCD11Q14690 1871 aaKnown RBP24.6■■□□□ 1.53
SFSWAP-204ENST00000535399 CALUO43852 315 aaPredicted RBP24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 EXOC3O60645 756 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 NR3C1P04150 777 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 KLRC2P26717 231 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 MCM4P33991 863 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 CYP24A1Q07973 514 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 MYBPC2Q14324 1141 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 PSMD6Q15008 389 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 AAK1Q2M2I8 961 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 COBLL1Q53SF7 1204 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 PPFIBP1Q86W92 1011 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 PTPRJQ12913 1337 aa24.59■■□□□ 1.53
SFSWAP-204ENST00000535399 TULP1O00294 542 aaPredicted RBP24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 SYN3O14994 580 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 ADH1AP07327 375 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 EPCAMP16422 314 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 RPL17P18621 184 aaKnown RBP24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 PRCPP42785 496 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 CLCN4P51793 760 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 SURF1Q15526 300 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 NFIL3Q16649 462 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 ZCWPW2Q504Y3 356 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 C1orf127Q8N9H9 656 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 CACTINQ8WUQ7 758 aaKnown RBP24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 CASP10Q92851 521 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 MFSD14AQ96MC6 490 aa24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 GTPBP4Q9BZE4 634 aaKnown RBP24.58■■□□□ 1.53
SFSWAP-204ENST00000535399 SPTLC1O15269 473 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 KCNQ1P51787 676 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 LILRA4P59901 499 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 CREMQ03060 361 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 PSMD5Q16401 504 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 LMBRD2Q68DH5 695 aaPredicted RBP24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 ANKRD54Q6NXT1 300 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 PDXDC1Q6P996 788 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 OR5B17Q8NGF7 314 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 CXorf38Q8TB03 319 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 CLSTN3Q9BQT9 956 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 MTMR12Q9C0I1 747 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 GZF1Q9H116 711 aaPredicted RBP24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 INTS13Q9NVM9 706 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 PCDHB8Q9UN66 801 aa24.57■■□□□ 1.52
SFSWAP-204ENST00000535399 ANK1P16157 1881 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 M0QZQ0 153 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 SRGAP2BP0DMP2 458 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 CASP4P49662 377 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 MRPL58Q14197 206 aaKnown RBP24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 CLUL1Q15846 466 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 VARS2Q5ST30 1063 aaKnown RBP24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 SCARA3Q6AZY7 606 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 SYCE2Q6PIF2 218 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 ANKS3Q6ZW76 656 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 MTRRQ9UBK8 725 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 SIX4Q9UIU6 781 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 CD207Q9UJ71 328 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 BACE2Q9Y5Z0 518 aa24.56■■□□□ 1.52
SFSWAP-204ENST00000535399 A0A0C4DFX4 3053 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 ADAM12O43184 909 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 BMP1P13497 986 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 BMP6P22004 513 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 PAX3P23760 479 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 CAMK4Q16566 473 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 ISM2Q6H9L7 571 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 CENPPQ6IPU0 288 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 WDR49Q8IV35 697 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 ADSSL1Q8N142 457 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 PLEKHO2Q8TD55 490 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 CCDC127Q96BQ5 260 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 CGRRF1Q99675 332 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 ITGA11Q9UKX5 1188 aa24.55■■□□□ 1.52
SFSWAP-204ENST00000535399 TBC1D4O60343 1298 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 ITGB3P05106 788 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 TMEM191BP0C7N4 346 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 DLATP10515 647 aaKnown RBP24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 POLR2BP30876 1174 aaKnown RBP24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 MORC3Q14149 939 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 DUOXA2Q1HG44 320 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 TJAP1Q5JTD0 557 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 LILRA6Q6PI73 481 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 RSPO2Q6UXX9 243 aaPredicted RBP24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 DSTYKQ6XUX3 929 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 GLYCTKQ8IVS8 523 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 SMRP1Q8NCR6 262 aa24.54■■□□□ 1.52
SFSWAP-204ENST00000535399 APPL2Q8NEU8 664 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms