RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 COG1Q8WTW3 980 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 TUBB6Q9BUF5 446 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
SPG11-203ENST00000535302 AKAP10O43572 662 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 NDUFB10O96000 172 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 LONRF1Q17RB8 773 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 CPSF1Q10570 1443 aaKnown RBP13.27□□□□□ -0.29
SPG11-203ENST00000535302 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 PBLDP30039 288 aaPredicted RBP13.27□□□□□ -0.29
SPG11-203ENST00000535302 AVPR1AP37288 418 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 MAP3K7CLP57077 242 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 P3H1Q32P28 736 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 CEP78Q5JTW2 689 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 CYP4A22Q5TCH4 519 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 OR9Q1Q8NGQ5 310 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 NOP53Q9NZM5 478 aaKnown RBP13.27□□□□□ -0.29
SPG11-203ENST00000535302 ZNF70Q9UC06 446 aaPredicted RBP13.27□□□□□ -0.29
SPG11-203ENST00000535302 ZNF609O15014 1411 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 HAUS5O94927 633 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 EYA4O95677 639 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 RALAP11233 206 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 KLRK1P26718 216 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 PPP2R2AP63151 447 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.29
SPG11-203ENST00000535302 EPHA7Q15375 998 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 CDKL3Q8IVW4 592 aaPredicted RBP13.26□□□□□ -0.29
SPG11-203ENST00000535302 PAWRQ96IZ0 340 aaKnown RBP13.26□□□□□ -0.29
SPG11-203ENST00000535302 EFCAB14O75071 495 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 ARFIP2P53365 341 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 ABCA8O94911 1581 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 KRT7P08729 469 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 PLD3Q8IV08 490 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 PABPC5Q96DU9 382 aaKnown RBP13.26□□□□□ -0.29
SPG11-203ENST00000535302 RNPC3Q96LT9 517 aaKnown RBP13.26□□□□□ -0.29
SPG11-203ENST00000535302 GOLPH3Q9H4A6 298 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 EXOSC4Q9NPD3 245 aaKnown RBP13.26□□□□□ -0.29
SPG11-203ENST00000535302 TNS3Q68CZ2 1445 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 HOXD10P28358 340 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 SH3BGRP55822 239 aaPredicted RBP13.26□□□□□ -0.29
SPG11-203ENST00000535302 ANKS3Q6ZW76 656 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 OR2W6PQ8NHA6 318 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 WNT8AQ9H1J5 351 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 PKP3Q9Y446 797 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 ASB14A6NK59 587 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
SPG11-203ENST00000535302 TCP11X1B4DZS4 312 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 BNIPLQ7Z465 357 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 CENPTQ96BT3 561 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 DDX56Q9NY93 547 aaKnown RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 CAB39Q9Y376 341 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 UBXN8O00124 270 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 USP11P51784 963 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 NME5P56597 212 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 DDX42Q86XP3 938 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPG11-203ENST00000535302 PNKPQ96T60 521 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 ETNK1Q9HBU6 452 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 ZBTB39O15060 712 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 CDK17Q00537 523 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 PIF1Q9H611 641 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 ACTR5Q9H9F9 607 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 DMAP1Q9NPF5 467 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 ADAM21Q9UKJ8 722 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 ENDOD1O94919 500 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 APRTP07741 180 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 TWF1Q12792 350 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 COG2Q14746 738 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 TAF1DQ9H5J8 278 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 DTNAQ9Y4J8 743 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 DAB1O75553 588 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 TMEM132DQ14C87 1099 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 EMC2Q15006 297 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 MAGED4Q96JG8 741 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 KDM4CQ9H3R0 1056 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 NFKBIAP25963 317 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 VEPH1Q14D04 833 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 MGAT5BQ3V5L5 792 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 ZNF614Q8N883 585 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 FAM162AQ96A26 154 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 KLF6Q99612 283 aaPredicted RBP13.25□□□□□ -0.29
SPG11-203ENST00000535302 PHF20Q9BVI0 1012 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 MAGEB5Q9BZ81 275 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 CD274Q9NZQ7 290 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms