RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ALYREFQ86V81 257 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 PDCL2Q8N4E4 241 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 ST13P5Q8NFI4 369 aaPredicted RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 INTS4Q96HW7 963 aaKnown RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 CLIC6Q96NY7 704 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 PRRX2Q99811 253 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 MSTO1Q9BUK6 570 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 EPS15L1Q9UBC2 864 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 FBXL21Q9UKT6 434 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 MTMR6Q9Y217 621 aa9.3□□□□□ -0.92
SFSWAP-202ENST00000535202 CCDC66A2RUB6 948 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 H7C4K7 107 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 OGTO15294 1046 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 STX6O43752 255 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 PIGRP01833 764 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 CFHP08603 1231 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 LAMP2P13473 410 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 SCP2P22307 547 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 HOXA9P31269 272 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 PTPN5P54829 565 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 ROR1Q01973 937 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 TCF15Q12870 199 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 SYCP1Q15431 976 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 KYAT1Q16773 422 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 UVSSAQ2YD98 709 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 RRAGBQ5VZM2 374 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 SFR1Q86XK3 245 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 FLCNQ8NFG4 579 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 DDX12PQ92771 950 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 KCNN1Q92952 543 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 USP28Q96RU2 1077 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 FIZ1Q96SL8 496 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 RPF1Q9H9Y2 349 aaKnown RBP9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 PLEKHA5Q9HAU0 1116 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 UBQLN1Q9UMX0 589 aaKnown RBP9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 SRPRBQ9Y5M8 271 aaKnown RBP9.29□□□□□ -0.92
SFSWAP-202ENST00000535202 ANK1P16157 1881 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 TTC26A0AVF1 554 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 WDR27A2RRH5 827 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 LACTBL1A8MY62 500 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 PRRG1O14668 218 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 XPOTO43592 962 aaKnown RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 LRG1P02750 347 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ELF1P32519 619 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ABCD1P33897 745 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 GTF2BQ00403 316 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 HTR4Q13639 388 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 STK38Q15208 465 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ENOX2Q16206 610 aaKnown RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 CTXN3Q4LDR2 81 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ZC2HC1CQ53FD0 456 aaPredicted RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 CWF19L1Q69YN2 538 aaKnown RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 SLC8B1Q6J4K2 584 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ZNF280DQ6N043 979 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 SLC39A4Q6P5W5 647 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 SV2BQ7L1I2 683 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 MAP4K3Q8IVH8 894 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 SIX5Q8N196 739 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 TMEM105Q8N8V8 129 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 APPL2Q8NEU8 664 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 NXPE3Q969Y0 559 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 CYP4F11Q9HBI6 524 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 HCFC1R1Q9NWW0 138 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 DNMT3BQ9UBC3 853 aaKnown RBP9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 FBXL5Q9UKA1 691 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 CDH7Q9ULB5 785 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 CA14Q9ULX7 337 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 PCDHB8Q9UN66 801 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 NUMBLQ9Y6R0 609 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 MUC6Q6W4X9 2439 aa9.28□□□□□ -0.92
SFSWAP-202ENST00000535202 NOTCH4Q99466 2003 aa9.27□□□□□ -0.92
SFSWAP-202ENST00000535202 A0A0B4J269 797 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 MYMKA6NI61 221 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 TISP43B9A030 160 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ANKRD63C9JTQ0 380 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 ANHXE9PGG2 379 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 STK25O00506 426 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 FAM189A1O60320 539 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 TBC1D4O60343 1298 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 POU2F2P09086 479 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 SRFP11831 508 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 CPB1P15086 417 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 CYP3A5P20815 502 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 CDK11BP21127 795 aaKnown RBP9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 RFX1P22670 979 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 LRPAP1P30533 357 aa9.27□□□□□ -0.93
SFSWAP-202ENST00000535202 STAT6P42226 847 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms