RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 GSTA3Q16772 222 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 P3H1Q32P28 736 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ZNF792Q3KQV3 632 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ODF2Q5BJF6 829 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 SNRNP48Q6IEG0 339 aaKnown RBP5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ANO7Q6IWH7 933 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 Q6ZNX1 250 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 BTN2A1Q7KYR7 527 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 BNIPLQ7Z465 357 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 MILR1Q7Z6M3 343 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 C12orf56Q8IXR9 622 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 SUPT20HQ8NEM7 779 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 OR10Z1Q8NGY1 313 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 PI4K2BQ8TCG2 481 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-201ENST00000535076 AFG1LQ8WV93 481 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ZNF274Q96GC6 653 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-201ENST00000535076 INTS4Q96HW7 963 aaKnown RBP5.53□□□□□ -1.52
SNHG1-201ENST00000535076 SPATA17Q96L03 361 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 MNTQ99583 582 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 COQ7Q99807 217 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ERP44Q9BS26 406 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 RUSC1Q9BVN2 902 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 CEP44Q9C0F1 390 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 NIF3L1Q9GZT8 377 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 CSRNP2Q9H175 543 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 VPS11Q9H270 941 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 C7orf69Q9H7B7 122 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 KAT14Q9H8E8 782 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 CAAP1Q9H8G2 361 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 VPS37BQ9H9H4 285 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 LIN7BQ9HAP6 207 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ATP13A1Q9HD20 1204 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 C12orf4Q9NQ89 552 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 GID8Q9NWU2 228 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 C9orf78Q9NZ63 289 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-201ENST00000535076 GMIPQ9P107 970 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 HSFX1Q9UBD0 423 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 ZNHIT2Q9UHR6 403 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 INTUQ9ULD6 942 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 MAPRE3Q9UPY8 281 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 CHMP2BQ9UQN3 213 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 RAXQ9Y2V3 346 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 RRP7AQ9Y3A4 280 aaKnown RBP5.53□□□□□ -1.52
SNHG1-201ENST00000535076 SPATA31E1Q6ZUB1 1445 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 PLXNC1O60486 1568 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 KIF21AQ7Z4S6 1674 aa5.53□□□□□ -1.52
SNHG1-201ENST00000535076 COL17A1Q9UMD9 1497 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 GOLGA8QA0A0J9YX86 632 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 HMX2A2RU54 273 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ANKRD34BA5PLL1 514 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 GOLGA8OA6NCC3 632 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 A8MVJ9 347 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 MIF4GDA9UHW6 222 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 E9PBE3 544 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 GOLGA8NF8WBI6 632 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 STX16-NPEPL1H3BU86 382 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 EIF1AYO14602 144 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 IRS4O14654 1257 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 XPO1O14980 1071 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 KPNA5O15131 536 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 HDAC3O15379 428 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 AP5Z1O43299 807 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 HYAL3O43820 417 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 KLHL2O95198 593 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 MED26O95402 600 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 FAM107AO95990 144 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ABCB1P08183 1280 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ADCY8P40145 1251 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 MASP1P48740 699 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 HSD17B4P51659 736 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ARHGDIBP52566 201 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 C21orf58P58505 322 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 VBP1P61758 197 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ATP8B2P98198 1209 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 APBA1Q02410 837 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 RELAQ04206 551 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 CHRNEQ04844 493 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 FAPQ12884 760 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 LRMPQ12912 555 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 MTX1Q13505 466 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 DCTN2Q13561 401 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 KPNB1Q14974 876 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 STILQ15468 1287 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 TAF1CQ15572 869 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ANKRD20A8PQ5CZ79 823 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ANKRD20A2Q5SQ80 823 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ANKRD20A1Q5TYW2 823 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 C12orf60Q5U649 245 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 ANKRD20A3Q5VUR7 823 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 KIAA0319Q5VV43 1072 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 BTBD8Q5XKL5 378 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 DUS1LQ6P1R4 473 aaKnown RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 BORAQ6PGQ7 559 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 RUFY4Q6ZNE9 571 aa5.52□□□□□ -1.53
SNHG1-201ENST00000535076 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-201ENST00000535076 CACNA2D4Q7Z3S7 1137 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms