RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CFB	P00751	764 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	A1BG	P04217	495 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CCND1	P24385	295 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CD40	P25942	277 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GNAL	P38405	381 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	FNTB	P49356	437 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZNF200	P98182	395 aa	Predicted RBP	5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GRIN1	Q05586	938 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MLC1	Q15049	377 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PLCL1	Q15111	1095 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	TPH2	Q8IWU9	490 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZZZ3	Q8IYH5	903 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	LILRA2	Q8N149	483 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CPA6	Q8N4T0	437 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	NYX	Q9GZU5	481 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	AP5M1	Q9H0R1	490 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MKS1	Q9NXB0	559 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	POLL	Q9UGP5	575 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442		R4GN57	208 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ADAMTS20	P59510	1910 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	TMEM8B	A6NDV4	472 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CYBB	P04839	570 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MME	P08473	750 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	RECQL	P46063	649 aa	Predicted RBP	5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ERVFRD-1	P60508	538 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PPIG	Q13427	754 aa	Known RBP eCLIP	5.63	□□□□□ -1.51	8e-6	■■■■□ 22.7
ECHDC1-223	ENST00000534442	PSRC1	Q6PGN9	363 aa	Predicted RBP	5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	C19orf48	Q6RUI8	117 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PAQR3	Q6TCH7	311 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MILR1	Q7Z6M3	343 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	TRIM48	Q8IWZ4	208 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CCDC146	Q8IYE0	955 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CMTR2	Q8IYT2	770 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MAGEB6	Q8N7X4	407 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	TTLL11	Q8NHH1	800 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	TGFBRAP1	Q8WUH2	860 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ASB15	Q8WXK1	588 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PEX11G	Q96HA9	241 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CLMP	Q9H6B4	373 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	RC3H2	Q9HBD1	1191 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	HCFC2	Q9Y5Z7	792 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	SALL1	Q9NSC2	1324 aa		5.63	□□□□□ -1.51
ECHDC1-223	ENST00000534442	SETD2	Q9BYW2	2564 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PHIP	Q8WWQ0	1821 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PRAMEF25	A6NGN4	478 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442		F8W031	263 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442		J3QKU1	62 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PF4V1	P10720	104 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	THBS2	P35442	1172 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ARL4A	P40617	200 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PIP4K2A	P48426	406 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	HERVK_113	P62684	666 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ANGPT1	Q15389	498 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZNF792	Q3KQV3	632 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PAN2	Q504Q3	1202 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GJC2	Q5T442	439 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZNF605	Q86T29	641 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CXorf67	Q86X51	503 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ERO1B	Q86YB8	467 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	SLC44A5	Q8NCS7	719 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GDPD5	Q8WTR4	605 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CCDC136	Q96JN2	1154 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	RIPOR3	Q96MK2	946 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	EYA3	Q99504	573 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MXD3	Q9BW11	206 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	RNF32	Q9H0A6	362 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	NUDT5	Q9UKK9	219 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ANKRD6	Q9Y2G4	727 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZNF804B	A4D1E1	1349 aa		5.62	□□□□□ -1.51
ECHDC1-223	ENST00000534442	NF1	P21359	2839 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	KLHL33	A6NCF5	533 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GOLGA6L22	H0YM25	854 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ELL2	O00472	640 aa	Predicted RBP	5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PQBP1	O60828	265 aa	Known RBP	5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	RAC2	P15153	192 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CSF2RA	P15509	400 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	FAH	P16930	419 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ADCY1	Q08828	1119 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PPIL2	Q13356	520 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZFHX3	Q15911	3703 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	FSCN1	Q16658	493 aa	Known RBP	5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	KRTAP21-3	Q3LHN1	58 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	C1orf141	Q5JVX7	400 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	MFSD5	Q6N075	450 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CXorf57	Q6NSI4	855 aa	Known RBP	5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	CILP2	Q8IUL8	1156 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	UBR2	Q8IWV8	1755 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	TP53INP2	Q8IXH6	220 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	JADE3	Q92613	823 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	LPAR1	Q92633	364 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ACAP3	Q96P50	834 aa		5.61	□□□□□ -1.51
ECHDC1-223	ENST00000534442	GBP4	Q96PP9	640 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms