RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 GAP43P17677 238 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 TNFSF9P41273 254 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 HTR4Q13639 388 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 POSTNQ15063 836 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 ENOX2Q16206 610 aaKnown RBP14.57□□□□□ -0.08
CAPN1-228ENST00000534373 CTXN3Q4LDR2 81 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 SPECC1Q5M775 1068 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 ZNF280DQ6N043 979 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 MTSS1LQ765P7 747 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 ALYREFQ86V81 257 aaKnown RBP14.57□□□□□ -0.08
CAPN1-228ENST00000534373 RSAD2Q8WXG1 361 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 DDX12PQ92771 950 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 FGF13Q92913 245 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 SNX21Q969T3 373 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 RTP3Q9BQQ7 232 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 MSTO1Q9BUK6 570 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 ASB7Q9H672 318 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 SLC2A4RGQ9NR83 387 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 DNMT3BQ9UBC3 853 aaKnown RBP14.57□□□□□ -0.08
CAPN1-228ENST00000534373 TUBGCP4Q9UGJ1 667 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 FBXL5Q9UKA1 691 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
CAPN1-228ENST00000534373 POLIQ9UNA4 740 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 DERAQ9Y315 318 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 DOCK8Q8NF50 2099 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 KMT2EQ8IZD2 1858 aa14.57□□□□□ -0.08
CAPN1-228ENST00000534373 WDR27A2RRH5 827 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 PRRG1O14668 218 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 LRG1P02750 347 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 NPR3P17342 541 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 PTPN2P17706 415 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 AOC1P19801 751 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 NMT1P30419 496 aaKnown RBP14.56□□□□□ -0.08
CAPN1-228ENST00000534373 AARSP49588 968 aaKnown RBP eCLIP14.56□□□□□ -0.08
CAPN1-228ENST00000534373 MRE11P49959 708 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 PABPC1LQ4VXU2 614 aaKnown RBP14.56□□□□□ -0.08
CAPN1-228ENST00000534373 SPATA1Q5VX52 437 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 FAM173BQ6P4H8 233 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 SLC39A4Q6P5W5 647 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 TMEM105Q8N8V8 129 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 STRA6Q9BX79 667 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 GDE1Q9NZC3 331 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 AFF4Q9UHB7 1163 aaKnown RBP14.56□□□□□ -0.08
CAPN1-228ENST00000534373 GTF3C3Q9Y5Q9 886 aa14.56□□□□□ -0.08
CAPN1-228ENST00000534373 NARSO43776 548 aaKnown RBP14.55□□□□□ -0.08
CAPN1-228ENST00000534373 MICAL2O94851 1124 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 NASPP49321 788 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-228ENST00000534373 NTHL1P78549 312 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 CEBPZQ03701 1054 aaKnown RBP14.55□□□□□ -0.08
CAPN1-228ENST00000534373 YWHAHQ04917 246 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-228ENST00000534373 SPAG1Q07617 926 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 ZC2HC1CQ53FD0 456 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-228ENST00000534373 ADALQ6DHV7 355 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 DYMQ7RTS9 669 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 SIX5Q8N196 739 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 FLCNQ8NFG4 579 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 DNAJC19Q96DA6 116 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 USP28Q96RU2 1077 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 CYP4F11Q9HBI6 524 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 OLFML3Q9NRN5 406 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 EXOC7Q9UPT5 735 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 C2CD2Q9Y426 696 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 NUMBLQ9Y6R0 609 aa14.55□□□□□ -0.08
CAPN1-228ENST00000534373 PDCD11Q14690 1871 aaKnown RBP14.55□□□□□ -0.08
CAPN1-228ENST00000534373 MYMKA6NI61 221 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ANKRD63C9JTQ0 380 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ZNF197O14709 1029 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 PPP6R2O75170 966 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 PPP1R37O75864 691 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 RHOP08100 348 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 CFHP08603 1231 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 TYMPP19971 482 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ARPP19P56211 112 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 LILRA4P59901 499 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ALCAMQ13740 583 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 CWF19L1Q69YN2 538 aaKnown RBP14.54□□□□□ -0.08
CAPN1-228ENST00000534373 PHLDB3Q6NSJ2 640 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 PARM1Q6UWI2 310 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 USP37Q86T82 979 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 SFR1Q86XK3 245 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 NT5DC4Q86YG4 428 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ELMOD1Q8N336 334 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 LINC00301Q8NCQ3 95 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ITFG1Q8TB96 612 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 FGF14Q92915 247 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 ZNF396Q96N95 335 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-228ENST00000534373 LRRC27Q9C0I9 530 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 MRPL44Q9H9J2 332 aaKnown RBP14.54□□□□□ -0.08
CAPN1-228ENST00000534373 HCFC1R1Q9NWW0 138 aa14.54□□□□□ -0.08
CAPN1-228ENST00000534373 AGO2Q9UKV8 859 aaKnown RBP14.54□□□□□ -0.08
CAPN1-228ENST00000534373 MRPS23Q9Y3D9 190 aaKnown RBP14.54□□□□□ -0.08
CAPN1-228ENST00000534373 FRMD3A2A2Y4 597 aa14.53□□□□□ -0.08
CAPN1-228ENST00000534373 OR6C75A6NL08 312 aa14.53□□□□□ -0.08
CAPN1-228ENST00000534373 PIRO00625 290 aa14.53□□□□□ -0.08
CAPN1-228ENST00000534373 SEC24AO95486 1093 aa14.53□□□□□ -0.08
CAPN1-228ENST00000534373 LDHAP00338 332 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms