RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 SUSD3Q96L08 255 aa23.33■■□□□ 1.33
SSH3-211ENST00000534112 ZSWIM3Q96MP5 696 aa23.33■■□□□ 1.33
SSH3-211ENST00000534112 FAM126AQ9BYI3 521 aaPredicted RBP23.33■■□□□ 1.33
SSH3-211ENST00000534112 KMT5AQ9NQR1 393 aa23.33■■□□□ 1.33
SSH3-211ENST00000534112 NDRG2Q9UN36 371 aaKnown RBP23.33■■□□□ 1.33
SSH3-211ENST00000534112 DNM3Q9UQ16 869 aa23.33■■□□□ 1.33
SSH3-211ENST00000534112 STK24Q9Y6E0 443 aa23.33■■□□□ 1.33
SSH3-211ENST00000534112 E9PMD0 336 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 IQCEQ6IPM2 695 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 MPZL3Q6UWV2 235 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 MAP4K3Q8IVH8 894 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 HS6ST3Q8IZP7 471 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 ELMOD1Q8N336 334 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 IGSF22Q8N9C0 903 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 SMARCD2Q92925 531 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 ZNF512Q96ME7 567 aaPredicted RBP23.32■■□□□ 1.32
SSH3-211ENST00000534112 LLPHQ9BRT6 129 aaKnown RBP23.32■■□□□ 1.32
SSH3-211ENST00000534112 RUSC1Q9BVN2 902 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 CHRDQ9H2X0 955 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 AFF4Q9UHB7 1163 aaKnown RBP23.32■■□□□ 1.32
SSH3-211ENST00000534112 LIMCH1Q9UPQ0 1083 aa23.32■■□□□ 1.32
SSH3-211ENST00000534112 MOSPD3O75425 235 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 NEFLP07196 543 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 PSMC3P17980 439 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 SDHBP21912 280 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 GNL2Q13823 731 aaKnown RBP23.31■■□□□ 1.32
SSH3-211ENST00000534112 ZNF280DQ6N043 979 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 VITQ6UXI7 678 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 MAMSTRQ6ZN01 415 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 APPL2Q8NEU8 664 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 ZBTB45Q96K62 511 aaPredicted RBP23.31■■□□□ 1.32
SSH3-211ENST00000534112 DRC1Q96MC2 740 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 C17orf75Q9HAS0 396 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 ZNF334Q9HCZ1 680 aaPredicted RBP23.31■■□□□ 1.32
SSH3-211ENST00000534112 TRPV5Q9NQA5 729 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 CEP72Q9P209 647 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 MAFFQ9ULX9 164 aa23.31■■□□□ 1.32
SSH3-211ENST00000534112 NOL7Q9UMY1 257 aaKnown RBP23.31■■□□□ 1.32
SSH3-211ENST00000534112 TPRP12270 2363 aaKnown RBP23.3■■□□□ 1.32
SSH3-211ENST00000534112 HARSP12081 509 aaKnown RBP23.3■■□□□ 1.32
SSH3-211ENST00000534112 GDI1P31150 447 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 MCM4P33991 863 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 ATXN1P54253 815 aaKnown RBP23.3■■□□□ 1.32
SSH3-211ENST00000534112 TWF1Q12792 350 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 MAPK7Q13164 816 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 PTGDRQ13258 359 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 SLC10A6Q3KNW5 377 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 RINT1Q6NUQ1 792 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 C1orf186Q6ZWK4 172 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 DDX12PQ92771 950 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 TBC1D32Q96NH3 1257 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 RAB34Q9BZG1 259 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 TRIP11Q15643 1979 aa23.3■■□□□ 1.32
SSH3-211ENST00000534112 PATJQ8NI35 1801 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 SFI1A8K8P3 1242 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 PRR5-ARHGAP8B1AHC4 643 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 SLC16A4O15374 487 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 TDGF1P13385 188 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 TGM1P22735 817 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 VIPR2P41587 438 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 EPHA5P54756 1037 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 ARHGAP8P85298 464 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 LMNB2Q03252 620 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 KRT79Q5XKE5 535 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 FAM3CQ92520 227 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 NTPCRQ9BSD7 190 aaKnown RBP23.29■■□□□ 1.32
SSH3-211ENST00000534112 LMAN1LQ9HAT1 526 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 TRPV4Q9HBA0 871 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 PCDHB8Q9UN66 801 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 PIAS3Q9Y6X2 628 aa23.29■■□□□ 1.32
SSH3-211ENST00000534112 PP2D1A8MPX8 630 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 MYL4P12829 197 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 GJA1P17302 382 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
SSH3-211ENST00000534112 TOB1P50616 345 aaPredicted RBP23.28■■□□□ 1.32
SSH3-211ENST00000534112 NRLP54845 237 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 SEZ6Q53EL9 994 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 RNF19BQ6ZMZ0 732 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 LEMD2Q8NC56 503 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 ZSCAN18Q8TBC5 510 aaPredicted RBP23.28■■□□□ 1.32
SSH3-211ENST00000534112 DEPDC1BQ8WUY9 529 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 IER2Q9BTL4 223 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 ASAH2Q9NR71 780 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 PCDHB6Q9Y5E3 794 aa23.28■■□□□ 1.32
SSH3-211ENST00000534112 ZNF263O14978 683 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 TOM1L1O75674 476 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 CDC25AP30304 524 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 HMGN5P82970 282 aaKnown RBP23.27■■□□□ 1.32
SSH3-211ENST00000534112 STRN3Q13033 797 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 PPP2R5DQ14738 602 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 IL17AQ16552 155 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 KCNK18Q7Z418 384 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 MFSD6LQ8IWD5 586 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 ANKFY1Q9P2R3 1169 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 TUBGCP4Q9UGJ1 667 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 GMEB2Q9UKD1 530 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 USP18Q9UMW8 372 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 EPG5Q9HCE0 2579 aa23.27■■□□□ 1.32
SSH3-211ENST00000534112 CPB1P15086 417 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 U2AF2P26368 475 aaKnown RBP eCLIP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms