RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CCDC149Q6ZUS6 474 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 SV2BQ7L1I2 683 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 ZDHHC14Q8IZN3 488 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 TDRD5Q8NAT2 981 aaKnown RBP10.49□□□□□ -0.73
SSBP3-215ENST00000533946 STKLD1Q8NE28 680 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 CMASQ8NFW8 434 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-215ENST00000533946 FGF14Q92915 247 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 KCNN1Q92952 543 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 RTP3Q9BQQ7 232 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 PLA2G2FQ9BZM2 168 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 KCND2Q9NZV8 630 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 POLIQ9UNA4 740 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 NCANO14594 1321 aa10.49□□□□□ -0.73
SSBP3-215ENST00000533946 KRBA1A5PL33 1030 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 MOSPD3O75425 235 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 ABLIM3O94929 683 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 NPR3P17342 541 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 GBP2P32456 591 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-215ENST00000533946 MCM4P33991 863 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 SIGLEC14Q08ET2 396 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 CUL4BQ13620 913 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 ADALQ6DHV7 355 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 PARM1Q6UWI2 310 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 C15orf39Q6ZRI6 1047 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 TMEM105Q8N8V8 129 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 BORCS6Q96GS4 357 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 SUSD3Q96L08 255 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 ZSWIM3Q96MP5 696 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 NECTIN4Q96NY8 510 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 ZSCAN16Q9H4T2 348 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-215ENST00000533946 MRPL44Q9H9J2 332 aaKnown RBP10.48□□□□□ -0.73
SSBP3-215ENST00000533946 TOPORSQ9NS56 1045 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-215ENST00000533946 PANK4Q9NVE7 773 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 FAM86C1Q9NVL1 165 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 CEP72Q9P209 647 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 STYXL1Q9Y6J8 313 aa10.48□□□□□ -0.73
SSBP3-215ENST00000533946 ZFHX2Q9C0A1 2572 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-215ENST00000533946 CACNA1HO95180 2353 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 POLR2DO15514 142 aaKnown RBP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SLC26A4O43511 780 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 LRRN2O75325 713 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 GCNT3O95395 438 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 CFHP08603 1231 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 LAMP2P13473 410 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 CEBPBP17676 345 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 LRPAP1P30533 357 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 AARSP49588 968 aaKnown RBP eCLIP10.47□□□□□ -0.734e-6■■■■■ 36.2
SSBP3-215ENST00000533946 LILRA4P59901 499 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 TCF15Q12870 199 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 CTXN3Q4LDR2 81 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SPATA1Q5VX52 437 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 C9orf57Q5W0N0 161 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 CWF19L1Q69YN2 538 aaKnown RBP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SLC8B1Q6J4K2 584 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SLC44A3Q8N4M1 653 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 OR10T2Q8NGX3 314 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 CXorf38Q8TB03 319 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 UROC1Q96N76 676 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 FAM213AQ9BRX8 229 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 ST6GALNAC4Q9H4F1 302 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 RPF1Q9H9Y2 349 aaKnown RBP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 PIDD1Q9HB75 910 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 GDPD2Q9HCC8 539 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 KBTBD4Q9NVX7 518 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 CCDC39Q9UFE4 941 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 AGO2Q9UKV8 859 aaKnown RBP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SORCS3Q9UPU3 1222 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SSX2IPQ9Y2D8 614 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 NR2E1Q9Y466 385 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 BACE2Q9Y5Z0 518 aa10.47□□□□□ -0.73
SSBP3-215ENST00000533946 MORC2Q9Y6X9 1032 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-215ENST00000533946 A0A1B0GVL5 298 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 ANO9A1A5B4 782 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 FSD2A1L4K1 749 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 M0QZQ0 153 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PIRO00625 290 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PPP6R2O75170 966 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 FSHRP23945 695 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 RPL9P32969 192 aaKnown RBP10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PLA2G5P39877 138 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 AFMP43652 599 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PPP2R3AQ06190 1150 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 ADCY1Q08828 1119 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 HTR4Q13639 388 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PPM1LQ5SGD2 360 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 STXBP5Q5T5C0 1151 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 L1TD1Q5T7N2 865 aaKnown RBP10.46□□□□□ -0.73
SSBP3-215ENST00000533946 LRRTM3Q86VH5 581 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 CBWD2Q8IUF1 395 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 GPR65Q8IYL9 337 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 FBXL6Q8N531 539 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 KCTD17Q8N5Z5 321 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms