RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 KREMEN1Q96MU8 473 aa10.37□□□□□ -0.75
CHKA-207ENST00000533728 RUNDC3BQ96NL0 473 aa10.37□□□□□ -0.75
CHKA-207ENST00000533728 JPH2Q9BR39 696 aaPredicted RBP10.37□□□□□ -0.75
CHKA-207ENST00000533728 ASCC2Q9H1I8 757 aaPredicted RBP10.37□□□□□ -0.75
CHKA-207ENST00000533728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHKA-207ENST00000533728 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
CHKA-207ENST00000533728 ATP11BQ9Y2G3 1177 aa10.37□□□□□ -0.75
CHKA-207ENST00000533728 ADGRA3Q8IWK6 1321 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 RALGAPA2Q2PPJ7 1873 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 GSTTP1A0A1W2PQM5 241 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 SOWAHBA6NEL2 793 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 A6NNZ2 444 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 DDX3YO15523 660 aaKnown RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 CEP104O60308 925 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 BUB1BO60566 1050 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 MAFO75444 373 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 HEXIM1O94992 359 aaKnown RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 FTLP02792 175 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 MYBL1P10243 752 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 CHRNB2P17787 502 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 ATP4AP20648 1035 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 UBA1P22314 1058 aaKnown RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 GLRA2P23416 452 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 CTNNA2P26232 953 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 TNNT3P45378 269 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 LIG4P49917 911 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 PDE6CP51160 858 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 IRX3P78415 501 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 POU5F1Q01860 360 aaKnown RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 SP2Q02086 613 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 TUBB8Q3ZCM7 444 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 ZACNQ401N2 412 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 MTERF2Q49AM1 385 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 SPDYCQ5MJ68 293 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 IER5LQ5T953 404 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 IER5Q5VY09 327 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 SV2AQ7L0J3 742 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 PLPPR4Q7Z2D5 763 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 CD302Q8IX05 232 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 UBL4BQ8N7F7 174 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 TRIM11Q96F44 468 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 MS4A14Q96JA4 679 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 SH3GL2Q99962 352 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 WNT8AQ9H1J5 351 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 SUGCTQ9HAC7 445 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 AVENQ9NQS1 362 aaPredicted RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 BTBD7Q9P203 1132 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 ADAM21Q9UKJ8 722 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 GTF3C4Q9UKN8 822 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 NOC2LQ9Y3T9 749 aaKnown RBP10.36□□□□□ -0.75
CHKA-207ENST00000533728 COL4A6Q14031 1691 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 CITO14578 2027 aa10.36□□□□□ -0.75
CHKA-207ENST00000533728 USP9XQ93008 2570 aaPredicted RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 DNAJC25-GNG10A0A024R161 153 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 GOLGA6L10A0A0M3HER8 536 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 GOLGA8IPA6NC78 632 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 GOLGA6BA6NDN3 693 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 FAM187AA6NFU0 413 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 GOLGA8JA6NMD2 632 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 TMCO5BA8MYB1 307 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 GOLGA8KD6RF30 607 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 K7ERI5 159 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 LRRN2O75325 713 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 CNMDO75829 334 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 SYF2O95926 243 aaKnown RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 C4BPAP04003 597 aaKnown RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 MYBL2P10244 700 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 CYP11B1P15538 503 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 TBXAS1P24557 533 aaPredicted RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 GBP1P32455 592 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 STAT5BP51692 787 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 FMO1Q01740 532 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 ZNF771Q7L3S4 317 aaPredicted RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 CYFIP1Q7L576 1253 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 ASCL5Q7RTU5 278 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 PPM1KQ8N3J5 372 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 DEPTORQ8TB45 409 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 DDX1Q92499 740 aaKnown RBP10.35□□□□□ -0.75
CHKA-207ENST00000533728 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 HLA-CQ95604 372 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 BICD1Q96G01 975 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 FAXDC2Q96IV6 333 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 FNBP1Q96RU3 617 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 PSMB7Q99436 277 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 KRT12Q99456 494 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 CGRRF1Q99675 332 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 FAM129AQ9BZQ8 928 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 MROH8Q9H579 483 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 FAM114A2Q9NRY5 505 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 C1orf112Q9NSG2 853 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 RBPJLQ9UBG7 517 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 LCMT1Q9UIC8 334 aa10.35□□□□□ -0.75
CHKA-207ENST00000533728 AGO2Q9UKV8 859 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms