RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NRCAMQ92823 1304 aa11.9□□□□□ -0.51
AMBRA1-211ENST00000533727 ANKRD26Q9UPS8 1709 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 CREB3O43889 395 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC4A1P02730 911 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 LCP1P13796 627 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 NME3Q13232 169 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 ABTB1Q969K4 478 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 HINFPQ9BQA5 517 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 SENP2Q9HC62 589 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 IRAK4Q9NWZ3 460 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 ANKRD65E5RJM6 399 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 SPECC1L-ADORA2AF8WAN1 911 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 KRT3P12035 628 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 EPHB3P54753 998 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 ZNF280AP59817 542 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 TPI1P60174 286 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 RAB42Q8N4Z0 105 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 PIK3C2AO00443 1686 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 NPHP3-ACAD11A0A0J9YXS1 232 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 MSH2P43246 934 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 SULT1E1P49888 294 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 KIZQ2M2Z5 673 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 ANKRD40Q6AI12 368 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC30A10Q6XR72 485 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 NUP85Q9BW27 656 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 DHX35Q9H5Z1 703 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 MOSPD1Q9UJG1 213 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 NNTQ13423 1086 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 PTPROQ16827 1216 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 ALS2CLQ60I27 953 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 LRRC8CQ8TDW0 803 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 WHAMMQ8TF30 809 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 CATSPERBQ9H7T0 1116 aa11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
AMBRA1-211ENST00000533727 FAM170AA1A519 330 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 DNAJC8O75937 253 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 CASP1P29466 404 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 PTPAQ15257 358 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 NECAB2Q7Z6G3 386 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ATP6V0D2Q8N8Y2 350 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 RFFLQ8WZ73 363 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 HDAC11Q96DB2 347 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 CYP3A43Q9HB55 503 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SETD4Q9NVD3 440 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 CHD2O14647 1828 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ANO9A1A5B4 782 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 TTI1O43156 1089 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ZMYND10O75800 440 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 MYBP10242 640 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 FDPSP14324 419 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 IL9RQ01113 521 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 UHMK1Q8TAS1 419 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SIK2Q9H0K1 926 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ABCB6Q9NP58 842 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 FAM50BQ9Y247 325 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 MORC2Q9Y6X9 1032 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 AHDC1Q5TGY3 1603 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ENC1O14682 589 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC37A4O43826 429 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 TOMM70O94826 608 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SAT1P21673 171 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 KPNA1P52294 538 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 ARL4CP56559 192 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC27A1Q6PCB7 646 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC5A5Q92911 643 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SH2D3AQ9BRG2 576 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 CNOT10Q9H9A5 744 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 XYLBO75191 536 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 NR1D1P20393 614 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 SLC11A2P49281 568 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 CTXN3Q4LDR2 81 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 TAF1BQ53T94 588 aaPredicted RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 DDX53Q86TM3 631 aaKnown RBP11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 PGBD3Q8N328 593 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 IL17RBQ9NRM6 502 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 TRPM5Q9NZQ8 1165 aa11.88□□□□□ -0.51
AMBRA1-211ENST00000533727 NFASCO94856 1347 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 FTCDO95954 541 aa11.87□□□□□ -0.51
AMBRA1-211ENST00000533727 LMBRD2Q68DH5 695 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms