RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 USP41Q3LFD5 358 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 PLPP4Q5VZY2 271 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 INTS8Q75QN2 995 aaKnown RBP15.75■□□□□ 0.11
SF3B2-214ENST00000533595 TAS1R1Q7RTX1 841 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 MICALL1Q8N3F8 863 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 CSGALNACT2Q8N6G5 542 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 C1orf127Q8N9H9 656 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 PLEKHO2Q8TD55 490 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 FAM84AQ96KN4 292 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 CEP63Q96MT8 703 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 GZF1Q9H116 711 aaPredicted RBP15.75■□□□□ 0.11
SF3B2-214ENST00000533595 NSUN3Q9H649 340 aaKnown RBP15.75■□□□□ 0.11
SF3B2-214ENST00000533595 RWDD2AQ9UIY3 292 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 ITGA11Q9UKX5 1188 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 EYSQ5T1H1 3165 aa15.75■□□□□ 0.11
SF3B2-214ENST00000533595 REV3LO60673 3130 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
SF3B2-214ENST00000533595 PPEF2O14830 753 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 SLC16A3O15427 465 aaKnown RBP15.74■□□□□ 0.11
SF3B2-214ENST00000533595 CXCL14O95715 111 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 ITGB3P05106 788 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 URODP06132 367 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 PAX3P23760 479 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 POLR2BP30876 1174 aaKnown RBP15.74■□□□□ 0.11
SF3B2-214ENST00000533595 CA8P35219 290 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 BRCC3P46736 316 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 GLUD2P49448 558 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 VAMP7P51809 220 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 AP3M2P53677 418 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 CLDN10P78369 228 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 ENPEPQ07075 957 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 FAM171A1Q5VUB5 890 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 KIAA1841Q6NSI8 718 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 PPP2R3CQ969Q6 453 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 MRPL17Q9NRX2 175 aaKnown RBP15.74■□□□□ 0.11
SF3B2-214ENST00000533595 CHST7Q9NS84 486 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 SSX2IPQ9Y2D8 614 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 STXBP5LQ9Y2K9 1186 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 R3HCC1Q9Y3T6 440 aaKnown RBP15.74■□□□□ 0.11
SF3B2-214ENST00000533595 PCDHGC5Q9Y5F6 944 aa15.74■□□□□ 0.11
SF3B2-214ENST00000533595 I3L4J1 428 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 IKBKBO14920 756 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 KRT19P08727 400 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 ERCC5P28715 1186 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-214ENST00000533595 PNPLA4P41247 253 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 AARSP49588 968 aaKnown RBP eCLIP15.73■□□□□ 0.11
SF3B2-214ENST00000533595 LILRA4P59901 499 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 DLG4P78352 724 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 RBP5P82980 135 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 DSG1Q02413 1049 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 BFSP1Q12934 665 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 STX1AQ16623 288 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 CT47A1Q5JQC4 288 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-214ENST00000533595 KIAA0319Q5VV43 1072 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
SF3B2-214ENST00000533595 TRAPPC11Q7Z392 1133 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 MRPL43Q8N983 215 aaKnown RBP15.73■□□□□ 0.11
SF3B2-214ENST00000533595 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 ZNF516Q92618 1163 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 BORCS6Q96GS4 357 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 SUSD3Q96L08 255 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 B3GALT6Q96L58 329 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 ZNF560Q96MR9 790 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 TTPALQ9BTX7 342 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 SRRTQ9BXP5 876 aaKnown RBP15.73■□□□□ 0.11
SF3B2-214ENST00000533595 ANO10Q9NW15 660 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 SIX4Q9UIU6 781 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 AGAP1Q9UPQ3 857 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 IRAK3Q9Y616 596 aa15.73■□□□□ 0.11
SF3B2-214ENST00000533595 ATG2AQ2TAZ0 1938 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 SCN1AP35498 2009 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 COL6A3P12111 3177 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 C2orf71A6NGG8 1288 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 HIDE1A8MVS5 230 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 C2CD2LO14523 706 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 FGFR1OPO95684 399 aaKnown RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 FGFR3P22607 806 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 TAF6P49848 677 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 NFKBIBQ15653 356 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 CCDC85BQ15834 202 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 TCEAL5Q5H9L2 206 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 C1orf220Q5T0J3 134 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 DSTYKQ6XUX3 929 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 CEP57Q86XR8 500 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 GPR65Q8IYL9 337 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 LRRC52Q8N7C0 313 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 CXorf38Q8TB03 319 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 RIN2Q8WYP3 895 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 MED15Q96RN5 788 aa15.72■□□□□ 0.11
SF3B2-214ENST00000533595 METTL14Q9HCE5 456 aaKnown RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 ARMCX3Q9UH62 379 aaPredicted RBP15.72■□□□□ 0.11
SF3B2-214ENST00000533595 PRUNE2Q8WUY3 3088 aa15.71■□□□□ 0.11
SF3B2-214ENST00000533595 M0QZQ0 153 aa15.71■□□□□ 0.11
SF3B2-214ENST00000533595 SYN3O14994 580 aa15.71■□□□□ 0.11
SF3B2-214ENST00000533595 SPTLC1O15269 473 aa15.71■□□□□ 0.11
SF3B2-214ENST00000533595 LILRB3O75022 631 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms