RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 ANO6Q4KMQ2 910 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 SPATA1Q5VX52 437 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 FUT10Q6P4F1 479 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 PPFIBP1Q86W92 1011 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 MSLNLQ96KJ4 702 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 FAM213AQ9BRX8 229 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 VN1R3Q9BXE9 311 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 HAPLN2Q9GZV7 340 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 GZF1Q9H116 711 aaPredicted RBP18.65■□□□□ 0.58
CTSB-229ENST00000533572 DNAJC25Q9H1X3 360 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 IKZF4Q9H2S9 585 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 PCIF1Q9H4Z3 704 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 SLC38A7Q9NVC3 462 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 CLEC1BQ9P126 229 aa18.65■□□□□ 0.58
CTSB-229ENST00000533572 SF3B1O75533 1304 aaKnown RBP eCLIP18.65■□□□□ 0.581e-8■■■■■ 103.8
CTSB-229ENST00000533572 TRIM49BA6NDI0 452 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 SMTNL1A8MU46 457 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 FAM189A1O60320 539 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 EPB41P11171 864 aaKnown RBP18.64■□□□□ 0.57
CTSB-229ENST00000533572 KLRC2P26717 231 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
CTSB-229ENST00000533572 ZNF165P49910 485 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 PMS1P54277 932 aaKnown RBP18.64■□□□□ 0.57
CTSB-229ENST00000533572 STX17P56962 302 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 RBM10P98175 930 aaKnown RBP18.64■□□□□ 0.57
CTSB-229ENST00000533572 SNRNP35Q16560 246 aaKnown RBP18.64■□□□□ 0.57
CTSB-229ENST00000533572 NT5DC4Q86YG4 428 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 VN1R2Q8NFZ6 395 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 RABGGTAQ92696 567 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 SNX27Q96L92 541 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 UROC1Q96N76 676 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 ASB7Q9H672 318 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 METTL14Q9HCE5 456 aaKnown RBP18.64■□□□□ 0.57
CTSB-229ENST00000533572 HCFC2Q9Y5Z7 792 aa18.64■□□□□ 0.57
CTSB-229ENST00000533572 F8W810 466 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 IKBKBO14920 756 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 HOXB8P17481 243 aaPredicted RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 MYL5Q02045 173 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 PPP2R3AQ06190 1150 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 ELAVL2Q12926 359 aaKnown RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 USP41Q3LFD5 358 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 CEP135Q66GS9 1140 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 ANKRD54Q6NXT1 300 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 TMEM184AQ6ZMB5 413 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 INTS8Q75QN2 995 aaKnown RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 BRSK2Q8IWQ3 736 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 SMRP1Q8NCR6 262 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 HASPINQ8TF76 798 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 SAAL1Q96ER3 474 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 POP1Q99575 1024 aaKnown RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 DUSP9Q99956 384 aaKnown RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 TSPY26PQ9H489 355 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 THAP9Q9H5L6 903 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 DZANK1Q9NVP4 752 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 RBAKQ9NYW8 714 aaPredicted RBP18.63■□□□□ 0.57
CTSB-229ENST00000533572 CACNG4Q9UBN1 327 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 PRKAG3Q9UGI9 489 aa18.63■□□□□ 0.57
CTSB-229ENST00000533572 SMIM28A0A1B0GU29 152 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 BECN2A8MW95 431 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 XPOTO43592 962 aaKnown RBP18.62■□□□□ 0.57
CTSB-229ENST00000533572 KIF4AO95239 1232 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 ADH1AP07327 375 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 ADRB2P07550 413 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 KRT13P13646 458 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 ACOT2P49753 483 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 CREMQ03060 361 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 SMAD2Q15796 467 aaKnown RBP18.62■□□□□ 0.57
CTSB-229ENST00000533572 ELMSAN1Q6PJG2 1045 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 CRELD2Q6UXH1 353 aaPredicted RBP18.62■□□□□ 0.57
CTSB-229ENST00000533572 C11orf57Q6ZUT1 292 aaPredicted RBP18.62■□□□□ 0.57
CTSB-229ENST00000533572 KLHL5Q96PQ7 755 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 PPP1R10Q96QC0 940 aaKnown RBP18.62■□□□□ 0.57
CTSB-229ENST00000533572 SRRTQ9BXP5 876 aaKnown RBP18.62■□□□□ 0.57
CTSB-229ENST00000533572 CXCL16Q9H2A7 254 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 DERAQ9Y315 318 aa18.62■□□□□ 0.57
CTSB-229ENST00000533572 CITO14578 2027 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 CNPP09543 421 aaKnown RBP18.61■□□□□ 0.57
CTSB-229ENST00000533572 TPM4P67936 248 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 DSG1Q02413 1049 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 KCNC3Q14003 757 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 ENOX2Q16206 610 aaKnown RBP18.61■□□□□ 0.57
CTSB-229ENST00000533572 SEZ6Q53EL9 994 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 XKR4Q5GH76 650 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 CES5AQ6NT32 575 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 TAS1R1Q7RTX1 841 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 FRMD5Q7Z6J6 570 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 FAM186BQ8IYM0 893 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 RNF168Q8IYW5 571 aaPredicted RBP18.61■□□□□ 0.57
CTSB-229ENST00000533572 TMC2Q8TDI7 906 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 RIN2Q8WYP3 895 aaPredicted RBP18.61■□□□□ 0.57
CTSB-229ENST00000533572 DDX27Q96GQ7 796 aaKnown RBP18.61■□□□□ 0.57
CTSB-229ENST00000533572 MFSD14AQ96MC6 490 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 FNBP1Q96RU3 617 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 PAAF1Q9BRP4 392 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 APOL5Q9BWW9 433 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 GPR62Q9BZJ7 368 aa18.61■□□□□ 0.57
CTSB-229ENST00000533572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms