RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TMEM173Q86WV6 379 aaPredicted RBP18.83■□□□□ 0.6
NXF1-216ENST00000533499 SLC39A11Q8N1S5 342 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 FAM200AQ8TCP9 573 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 FAM161BQ96MY7 647 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 SAMD11Q96NU1 681 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 ANP32EQ9BTT0 268 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 ZNF576Q9H609 170 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 ALG13Q9NP73 1137 aaKnown RBP18.83■□□□□ 0.6
NXF1-216ENST00000533499 TAB2Q9NYJ8 693 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
NXF1-216ENST00000533499 FGF18O76093 207 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 ITGB1P05556 798 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 TPM2P07951 284 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 IGFBP6P24592 240 aaPredicted RBP18.82■□□□□ 0.6
NXF1-216ENST00000533499 EEF1GP26641 437 aaKnown RBP18.82■□□□□ 0.6
NXF1-216ENST00000533499 LRPAP1P30533 357 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 BRCC3P46736 316 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 GPM6BQ13491 265 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 IQCB1Q15051 598 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 TCP11X2Q5H9J9 407 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 HABP4Q5JVS0 413 aaKnown RBP18.82■□□□□ 0.6
NXF1-216ENST00000533499 TDRD10Q5VZ19 366 aaKnown RBP18.82■□□□□ 0.6
NXF1-216ENST00000533499 DSTYKQ6XUX3 929 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 TRIM59Q8IWR1 403 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 BCL7CQ8WUZ0 217 aaPredicted RBP18.82■□□□□ 0.6
NXF1-216ENST00000533499 SLC35C1Q96A29 364 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 IGSF21Q96ID5 467 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 C11orf84Q9BUA3 381 aaPredicted RBP18.82■□□□□ 0.6
NXF1-216ENST00000533499 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 MARCH5Q9NX47 278 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 ADAM28Q9UKQ2 775 aa18.82■□□□□ 0.6
NXF1-216ENST00000533499 CARNS1A5YM72 827 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 RFXAPO00287 272 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 AFPP02771 609 aaKnown RBP18.81■□□□□ 0.6
NXF1-216ENST00000533499 C4BPAP04003 597 aaKnown RBP18.81■□□□□ 0.6
NXF1-216ENST00000533499 LINC00271P0C7V0 271 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 MYL7Q01449 175 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 KCNH2Q12809 1159 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 MYO1EQ12965 1108 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 NCOA4Q13772 614 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 ZNF697Q5TEC3 545 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 CDKAL1Q5VV42 579 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 KRT39Q6A163 491 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 SCARA3Q6AZY7 606 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 CEP57Q86XR8 500 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 C3orf58Q8NDZ4 430 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 ELMO3Q96BJ8 720 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 HPDLQ96IR7 371 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 ZNF560Q96MR9 790 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 TUBGCP2Q9BSJ2 902 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 PLVAPQ9BX97 442 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 VPS16Q9H269 839 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 PUF60Q9UHX1 559 aaKnown RBP18.81■□□□□ 0.6
NXF1-216ENST00000533499 SIX4Q9UIU6 781 aa18.81■□□□□ 0.6
NXF1-216ENST00000533499 SCN1AP35498 2009 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 PIRO00625 290 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 CST3P01034 146 aaPredicted RBP18.8■□□□□ 0.6
NXF1-216ENST00000533499 HLA-DRAP01903 254 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 RB1P06400 928 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 GTF2H1P32780 548 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 FMO5P49326 533 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 TAF6P49848 677 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 MARSP56192 900 aaKnown RBP18.8■□□□□ 0.6
NXF1-216ENST00000533499 MYL6P60660 151 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 CLDN10P78369 228 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 ENPEPQ07075 957 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 MAN2A1Q16706 1144 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 ZACNQ401N2 412 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 SV2CQ496J9 727 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 CBWD6Q4V339 395 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 CBWD3Q5JTY5 395 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 CBWD5Q5RIA9 395 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 FAM171A1Q5VUB5 890 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 FUT10Q6P4F1 479 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 CCDC150Q8NCX0 1101 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 MICAL1Q8TDZ2 1067 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 TAS1R2Q8TE23 839 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
NXF1-216ENST00000533499 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.61e-8■■■■■ 160.4
NXF1-216ENST00000533499 ANO9A1A5B4 782 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 TRAPPC3O43617 180 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 N4BP1O75113 896 aaKnown RBP18.79■□□□□ 0.6
NXF1-216ENST00000533499 ATP1A3P13637 1013 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 PNPLA4P41247 253 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 CETN1Q12798 172 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 KRT31Q15323 416 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 ZNF699Q32M78 642 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 KIAA1841Q6NSI8 718 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 B3GALT6Q96L58 329 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 PI4K2AQ9BTU6 479 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 IMPG2Q9BZV3 1241 aa18.79■□□□□ 0.6
NXF1-216ENST00000533499 NXF1Q9UBU9 619 aaKnown RBP18.79■□□□□ 0.6
NXF1-216ENST00000533499 EPOPA6NHQ4 379 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 C2CD2LO14523 706 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 SPTLC1O15269 473 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 GRM6O15303 877 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 VNN1O95497 513 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 LILRA4P59901 499 aa18.78■□□□□ 0.6
NXF1-216ENST00000533499 LRMPQ12912 555 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms