RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 CLMNQ96JQ2 1002 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 FAM129AQ9BZQ8 928 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 TRIM7Q9C029 511 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 R3HDMLQ9H3Y0 253 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 ATP8A1Q9Y2Q0 1164 aa20.57■□□□□ 0.88
UBXN1-215ENST00000533476 IGKV6-21A0A0C4DH24 114 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 TTLL13PA6NNM8 815 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 ZBTB42B2RXF5 422 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 ZNF132P52740 706 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 PLTPP55058 493 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 LAMTOR4Q0VGL1 99 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 PTP4A2Q12974 167 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 MKRN4PQ13434 485 aaPredicted RBP20.56■□□□□ 0.88
UBXN1-215ENST00000533476 ZBTB8OSQ8IWT0 167 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 CCDC105Q8IYK2 499 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 ANKRD13AQ8IZ07 590 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 ARFGAP2Q8N6H7 521 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 FBXO25Q8TCJ0 367 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 SLCO2A1Q92959 643 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 ACO2Q99798 780 aaKnown RBP20.56■□□□□ 0.88
UBXN1-215ENST00000533476 IMPG2Q9BZV3 1241 aa20.56■□□□□ 0.88
UBXN1-215ENST00000533476 PASKQ96RG2 1323 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 PROSCO94903 275 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 ASS1P00966 412 aaKnown RBP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 PGK2P07205 417 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 SEZ6Q53EL9 994 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 MAIP1Q8WWC4 291 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 C2orf40Q9H1Z8 148 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 TMEM51Q9NW97 253 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 DNAJC25-GNG10A0A024R161 153 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 NOP56O00567 594 aaKnown RBP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 PRKCBP05771 671 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 CFHP08603 1231 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 NUDT17P0C025 328 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 TNFSF9P41273 254 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 MCL1Q07820 350 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 PPIL2Q13356 520 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 TTC19Q6DKK2 380 aaPredicted RBP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 EPB41L4BQ9H329 900 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 PABPC3Q9H361 631 aaKnown RBP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 CENPHQ9H3R5 247 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 MRPL47Q9HD33 250 aaKnown RBP20.55■□□□□ 0.88
UBXN1-215ENST00000533476 TXNRD2Q9NNW7 524 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 ADAM22Q9P0K1 906 aa20.55■□□□□ 0.88
UBXN1-215ENST00000533476 ATXN2Q99700 1313 aaKnown RBP20.54■□□□□ 0.88
UBXN1-215ENST00000533476 ABLIM1O14639 778 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 OGTO15294 1046 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 MARK3P27448 753 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 PMS2P54278 862 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 MAPK6Q16659 721 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 HSDL1Q3SXM5 330 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 ZBTB33Q86T24 672 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 TRIM50Q86XT4 487 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 SPATS2Q86XZ4 545 aaKnown RBP20.54■□□□□ 0.88
UBXN1-215ENST00000533476 PASD1Q8IV76 773 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 PPM1EQ8WY54 764 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 DDX27Q96GQ7 796 aaKnown RBP20.54■□□□□ 0.88
UBXN1-215ENST00000533476 C11orf70Q9BRQ4 267 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 RBPJLQ9UBG7 517 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 MTRF1LQ9UGC7 380 aaKnown RBP20.54■□□□□ 0.88
UBXN1-215ENST00000533476 SCINQ9Y6U3 715 aa20.54■□□□□ 0.88
UBXN1-215ENST00000533476 A0A087WUV0 522 aaPredicted RBP20.53■□□□□ 0.88
UBXN1-215ENST00000533476 THAP12O43422 761 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 PSTPIP1O43586 416 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 ECEL1O95672 775 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 CCT5P48643 541 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 KCTD2Q14681 263 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 PLCB4Q15147 1175 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 SURF1Q15526 300 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 SMYD5Q6GMV2 418 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 PLEKHA7Q6IQ23 1121 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 LLGL2Q6P1M3 1020 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 RNF149Q8NC42 400 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 MMP19Q99542 508 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 JPH2Q9BR39 696 aaPredicted RBP20.53■□□□□ 0.88
UBXN1-215ENST00000533476 TCHPQ9BT92 498 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 CPSF3Q9UKF6 684 aaKnown RBP20.53■□□□□ 0.88
UBXN1-215ENST00000533476 CPP00450 1065 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 SRGAP2CP0DJJ0 459 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 LSP1P33241 339 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 NF2P35240 595 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 MDH1P40925 334 aaKnown RBP20.53■□□□□ 0.88
UBXN1-215ENST00000533476 SLC26A2P50443 739 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 MAMLD1Q13495 774 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 MOGSQ13724 837 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 KRT71Q3SY84 523 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 C2CD6Q53TS8 623 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 SGO2Q562F6 1265 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 PHLDB2Q86SQ0 1253 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 ART4Q93070 314 aa20.53■□□□□ 0.88
UBXN1-215ENST00000533476 MAN1A1P33908 653 aa20.52■□□□□ 0.88
UBXN1-215ENST00000533476 GUCY1A3Q02108 690 aa20.52■□□□□ 0.88
UBXN1-215ENST00000533476 IFFO1Q0D2I5 559 aa20.52■□□□□ 0.88
UBXN1-215ENST00000533476 CCDC62Q6P9F0 684 aa20.52■□□□□ 0.88
UBXN1-215ENST00000533476 MMS22LQ6ZRQ5 1243 aa20.52■□□□□ 0.88
UBXN1-215ENST00000533476 B4GALNT4Q76KP1 1039 aa20.52■□□□□ 0.88
UBXN1-215ENST00000533476 LRRC71Q8N4P6 559 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms