RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FSCBQ5H9T9 825 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 CCT8L2Q96SF2 557 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 ZFATQ9P243 1243 aa18.5■□□□□ 0.55
PHRF1-205ENST00000533464 CTSHP09668 335 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 Q4G0T1 1027 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 SLC16A10Q8TF71 515 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 HNRNPLLQ8WVV9 542 aaKnown RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 RAPGEF5Q92565 580 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 PACSIN1Q9BY11 444 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 EPN3Q9H201 632 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 FAM96AQ9H5X1 160 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 RIMS1Q86UR5 1692 aaKnown RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 NFIBO00712 420 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 NVLO15381 856 aaKnown RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 CHN1P15882 459 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 PSMC6P62333 389 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 KIF19Q2TAC6 998 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 TPX2Q9ULW0 747 aaKnown RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 ACAD11Q709F0 780 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 PGBD4Q96DM1 585 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 ATXN7L3BQ96GX2 97 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 FGD4Q96M96 766 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 SLC4A9Q96Q91 983 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 EPAS1Q99814 870 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 A0A087X0B3 334 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 TRPA1O75762 1119 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 APOEP02649 317 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 BRD2P25440 801 aaKnown RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 RFC1P35251 1148 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 NPTX2P47972 431 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 SULT1E1P49888 294 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 TPI1P60174 286 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 SMTNL2Q2TAL5 461 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 ZNF720Q7Z2F6 126 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 RASSF3Q86WH2 238 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 KIAA0895Q8NCT3 520 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 FEZF2Q8TBJ5 459 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 GRAMD1AQ96CP6 724 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 DDX27Q96GQ7 796 aaKnown RBP18.49■□□□□ 0.55
PHRF1-205ENST00000533464 AGAP3Q96P47 875 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 SMYD3Q9H7B4 428 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 ARHGAP20Q9P2F6 1191 aa18.49■□□□□ 0.55
PHRF1-205ENST00000533464 CFAP69A5D8W1 941 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 CHUKO15111 745 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 EIF3HO15372 352 aaKnown RBP eCLIP18.48■□□□□ 0.551e-7■■□□□ 12.8
PHRF1-205ENST00000533464 CST8O60676 142 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 TTC8Q8TAM2 541 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 MYCBPQ99417 103 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-205ENST00000533464 SP110Q9HB58 689 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 TAL1P17542 331 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-205ENST00000533464 MUTP22033 750 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 HSD17B4P51659 736 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 BACE1P56817 501 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 PRAMEP78395 509 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 CACNB2Q08289 660 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-205ENST00000533464 MTM1Q13496 603 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 HAUS8Q9BT25 410 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 CPB1P15086 417 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 HERVK_113P62684 666 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 CYP2W1Q8TAV3 490 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 BTBD6Q96KE9 485 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 SCOCQ9UIL1 159 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 DFFAO00273 331 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 SGPL1O95470 568 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 UBA3Q8TBC4 463 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 PARD3BQ8TEW8 1205 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 SLC8A2Q9UPR5 921 aa18.48■□□□□ 0.55
PHRF1-205ENST00000533464 NSUN2Q08J23 767 aaKnown RBP eCLIP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 DRP2Q13474 957 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 NT5DC1Q5TFE4 455 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 ACAD10Q6JQN1 1059 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 SLC30A10Q6XR72 485 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 C4orf33Q8N1A6 199 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 GPRC5AQ8NFJ5 357 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 CDC26Q8NHZ8 85 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 SPATA18Q8TC71 538 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 ARHGEF26Q96DR7 871 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 UPF3AQ9H1J1 476 aaKnown RBP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 PLEKHA5Q9HAU0 1116 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 DDX4Q9NQI0 724 aaKnown RBP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 GGT7Q9UJ14 662 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 PHF20L1A8MW92 1017 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 GSTA4O15217 222 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 RALAP11233 206 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 CUL2Q13617 745 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 TTC36A6NLP5 189 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 RBP3P10745 1247 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 CYP2B6P20813 491 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 HSP90AA5PQ58FG0 334 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 SPATA21Q7Z572 469 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 SLC13A5Q86YT5 568 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 ZC3H7BQ9UGR2 993 aaKnown RBP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 SUN2Q9UH99 717 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 SMIM24O75264 130 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 CYP2C9P11712 490 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 ITGA8P53708 1063 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 CDR2Q01850 454 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 C1orf131Q8NDD1 294 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms