RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 PALB2Q86YC2 1186 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 CD302Q8IX05 232 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 C3orf58Q8NDZ4 430 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 ZSWIM2Q8NEG5 633 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 UHRF1Q96T88 793 aaPredicted RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 RBAKQ9NYW8 714 aaPredicted RBP12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 CLEC1BQ9P126 229 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 STYXL1Q9Y6J8 313 aa12.44□□□□□ -0.42
UBASH3B-208ENST00000533451 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 EXTL3O43909 919 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 KINO60870 393 aaKnown RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 BMP1P13497 986 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 IGFBP6P24592 240 aaPredicted RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 TKTP29401 623 aaKnown RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 ARPP19P56211 112 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 TFAMQ00059 246 aaKnown RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 PNOCQ13519 176 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 CES5AQ6NT32 575 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 DSTYKQ6XUX3 929 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 C12orf76Q8N812 135 aaPredicted RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 SCFD1Q8WVM8 642 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 COL25A1Q9BXS0 654 aaPredicted RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 ASB7Q9H672 318 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 DZANK1Q9NVP4 752 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 HSPBP1Q9NZL4 362 aa12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 USP15Q9Y4E8 981 aaPredicted RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.43□□□□□ -0.42
UBASH3B-208ENST00000533451 UNC80Q8N2C7 3258 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 GRXCR2A6NFK2 248 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 TMEM189-UBE2V1I3L0A0 370 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 MBTPS2O43462 519 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 KLRC4O43908 158 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 WEE2P0C1S8 567 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 SP100P23497 879 aaPredicted RBP12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 STK4Q13043 487 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 PSMD2Q13200 908 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 EPM2AIP1Q7L775 607 aaPredicted RBP12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 FBXL18Q96ME1 805 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 PDE11AQ9HCR9 933 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 MAN1C1Q9NR34 630 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 CHST7Q9NS84 486 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 DPP3Q9NY33 737 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 MAPK8IP1Q9UQF2 711 aa12.42□□□□□ -0.42
UBASH3B-208ENST00000533451 ZNF233A6NK53 670 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 KIAA0391O15091 583 aaKnown RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 EXOC3O60645 756 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 KIF20AO95235 890 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 SMC2O95347 1197 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 KRT19P08727 400 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 TMEM191BP0C7N4 346 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 HOXB8P17481 243 aaPredicted RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 CYP3A5P20815 502 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 FGFR3P22607 806 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 HOXD13P35453 343 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 SCN1AP35498 2009 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 CLCN4P51793 760 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 EHHADHQ08426 723 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 DPYDQ12882 1025 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 KNOP1Q1ED39 458 aaKnown RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 SPATA1Q5VX52 437 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 CRELD2Q6UXH1 353 aaPredicted RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 TMC5Q6UXY8 1006 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 ANKS3Q6ZW76 656 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 USP37Q86T82 979 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 CBWD2Q8IUF1 395 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 FMR1NBQ8N0W7 255 aaPredicted RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 KIAA0895Q8NCT3 520 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 APPL2Q8NEU8 664 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 SLC22A17Q8WUG5 538 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 PIK3R5Q8WYR1 880 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 MSLNLQ96KJ4 702 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 FAM84AQ96KN4 292 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 DERAQ9Y315 318 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 C2CD2Q9Y426 696 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 CDY1Q9Y6F8 540 aa12.41□□□□□ -0.42
UBASH3B-208ENST00000533451 H7C4K7 107 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 PPEF2O14830 753 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 LILRB3O75022 631 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms