RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 SREBF2Q12772 1141 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 USP4Q13107 963 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CMTR1Q8N1G2 835 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 INO80BQ9C086 356 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 RPRD1BQ9NQG5 326 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 RBM12Q9NTZ6 932 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 BTN3A3O00478 584 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ZW10O43264 779 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TOMM70O94826 608 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ALOX15P16050 662 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 NLRP11P59045 1033 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CTDSPL2Q05D32 466 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MCL1Q07820 350 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 NR1D2Q14995 579 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TRMT5Q32P41 509 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 KLHL17Q6TDP4 642 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 BNIPLQ7Z465 357 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 APOBEC3FQ8IUX4 373 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 FAF2Q96CS3 445 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CALN1Q9BXU9 219 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 NEUROG2Q9H2A3 272 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TTC7AQ9ULT0 858 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 LRRC53A6NM62 1247 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PDIA2Q13087 525 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MAPRE1Q15691 268 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 AOC3Q16853 763 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CCDC60Q8IWA6 550 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CCNYL1Q8N7R7 359 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 GIMAP8Q8ND71 665 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 C19orf18Q8NEA5 215 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 AGR3Q8TD06 166 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CNOT3O75175 753 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CALB2P22676 271 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 KRT20P35900 424 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 HSD17B3P37058 310 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PTK2BQ14289 1009 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 YTHDF3Q7Z739 585 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ZNF654Q8IZM8 581 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ALKBH8Q96BT7 664 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 SLC7A5P2Q9GIP4 190 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 FBXO40Q9UH90 709 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MAGED2Q9UNF1 606 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TTC26A0AVF1 554 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 KBTBD13C9JR72 458 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PRDM1O75626 825 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 RALGDSQ12967 914 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 DBNDD2Q9BQY9 259 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 APOL6Q9BWW8 343 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 OSBPL3Q9H4L5 887 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 COPG2Q9UBF2 871 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 GOLGA4Q13439 2230 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ANGPT2O15123 496 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ASAP2O43150 1006 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 EFCAB14O75071 495 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PTPN4P29074 926 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 SCNN1BP51168 640 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ITKQ08881 620 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 DNAJC3Q13217 504 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PPP6R3Q5H9R7 873 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 KIAA1755Q5JYT7 1200 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 FAM45BPQ6NSW5 357 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TRIM69Q86WT6 500 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 SKA2Q8WVK7 121 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 GPCPD1Q9NPB8 672 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MOSPD1Q9UJG1 213 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ITM2BQ9Y287 266 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 PRR36Q9H6K5 1346 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MED26O95402 600 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 ALDH5A1P51649 535 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MFSD14BQ5SR56 506 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 RESP18Q5W5W9 173 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 LVRNQ6Q4G3 990 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 MARK2Q7KZI7 788 aaKnown RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 GET4Q7L5D6 327 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TTLL6Q8N841 843 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 AGAP11Q8TF27 550 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 EFHD2Q96C19 240 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 RUBCNLQ9H714 662 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 USE1Q9NZ43 259 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CLIC5Q9NZA1 410 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 CEP72Q9P209 647 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 FAM50BQ9Y247 325 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 SPEF1Q9Y4P9 236 aa8.22□□□□□ -1.09
CSRP1-218ENST00000533402 SOS2Q07890 1332 aaPredicted RBP8.22□□□□□ -1.09
CSRP1-218ENST00000533402 TEX33O43247 280 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 TIMM10P62072 90 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 ARHGAP17Q68EM7 881 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 BARGINQ6ZT62 677 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 RBM41Q96IZ5 413 aaKnown RBP8.21□□□□□ -1.09
CSRP1-218ENST00000533402 CCDC17Q96LX7 622 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 SLC13A4Q9UKG4 626 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 NDUFB9Q9Y6M9 179 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 PRR23AA6NEV1 266 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms