RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 NHLH1Q02575 133 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 TPGS2Q68CL5 300 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 SLC39A4Q6P5W5 647 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 DYMQ7RTS9 669 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 KCNH3Q9ULD8 1083 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 DERAQ9Y315 318 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 NOTCH4Q99466 2003 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 ANK1P16157 1881 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 ARHGEF37A1IGU5 675 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 ANHXE9PGG2 379 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 ATF2P15336 505 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 AARSP49588 968 aaKnown RBP eCLIP25.49■■□□□ 1.67
SMPD1-209ENST00000533196 STK38Q15208 465 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 CTXN3Q4LDR2 81 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 IER5LQ5T953 404 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 SFR1Q86XK3 245 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 TCEAL8Q8IYN2 117 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 PRSS33Q8NF86 280 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 DNAJC19Q96DA6 116 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 ZNF396Q96N95 335 aaPredicted RBP25.49■■□□□ 1.67
SMPD1-209ENST00000533196 IRF2BPLQ9H1B7 796 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 MFSD1Q9H3U5 465 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 ASB7Q9H672 318 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 WNT16Q9UBV4 365 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 FBXL5Q9UKA1 691 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 CDH7Q9ULB5 785 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 POLIQ9UNA4 740 aa25.49■■□□□ 1.67
SMPD1-209ENST00000533196 WDR27A2RRH5 827 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 MYMKA6NI61 221 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 PPP6R2O75170 966 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 PPP1R37O75864 691 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 STAT6P42226 847 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 CLCN5P51795 746 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 POSTNQ15063 836 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 ZC2HC1CQ53FD0 456 aaPredicted RBP25.48■■□□□ 1.67
SMPD1-209ENST00000533196 ZBTB41Q5SVQ8 909 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 SPATA1Q5VX52 437 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 ADALQ6DHV7 355 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 HSCBQ8IWL3 235 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 SLC44A3Q8N4M1 653 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 LINC00301Q8NCQ3 95 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 STRA6Q9BX79 667 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 AVENQ9NQS1 362 aaPredicted RBP25.48■■□□□ 1.67
SMPD1-209ENST00000533196 OLFML3Q9NRN5 406 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 EXOC7Q9UPT5 735 aa25.48■■□□□ 1.67
SMPD1-209ENST00000533196 LRG1P02750 347 aa25.47■■□□□ 1.67
SMPD1-209ENST00000533196 SPAG1Q07617 926 aa25.47■■□□□ 1.67
SMPD1-209ENST00000533196 HTR4Q13639 388 aa25.47■■□□□ 1.67
SMPD1-209ENST00000533196 ALCAMQ13740 583 aa25.47■■□□□ 1.67
SMPD1-209ENST00000533196 ASTLQ6HA08 431 aaPredicted RBP25.47■■□□□ 1.67
SMPD1-209ENST00000533196 BEST2Q8NFU1 509 aa25.47■■□□□ 1.67
SMPD1-209ENST00000533196 MRPL44Q9H9J2 332 aaKnown RBP25.47■■□□□ 1.67
SMPD1-209ENST00000533196 FBXL21Q9UKT6 434 aa25.47■■□□□ 1.67
SMPD1-209ENST00000533196 AGO2Q9UKV8 859 aaKnown RBP25.47■■□□□ 1.67
SMPD1-209ENST00000533196 ANKRD63C9JTQ0 380 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 SPTLC2O15270 562 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 OAZ2O95190 189 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 SRFP11831 508 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 YWHAHQ04917 246 aaPredicted RBP25.46■■□□□ 1.67
SMPD1-209ENST00000533196 PABPC1LQ4VXU2 614 aaKnown RBP25.46■■□□□ 1.67
SMPD1-209ENST00000533196 MTSS1LQ765P7 747 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 RSAD2Q8WXG1 361 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 LRRC27Q9C0I9 530 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 DNMT3BQ9UBC3 853 aaKnown RBP25.46■■□□□ 1.67
SMPD1-209ENST00000533196 AFF4Q9UHB7 1163 aaKnown RBP25.46■■□□□ 1.67
SMPD1-209ENST00000533196 C2CD2Q9Y426 696 aa25.46■■□□□ 1.67
SMPD1-209ENST00000533196 FRMD3A2A2Y4 597 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 PRRG1O14668 218 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 YEATS4O95619 227 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 NTHL1P78549 312 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 FGF13Q92913 245 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 ACCSQ96QU6 501 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 PCDHB13Q9Y5F0 798 aa25.45■■□□□ 1.66
SMPD1-209ENST00000533196 PTPN2P17706 415 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 TYMPP19971 482 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 ARPP19P56211 112 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 TCF15Q12870 199 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 TMEM132DQ14C87 1099 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 L1TD1Q5T7N2 865 aaKnown RBP25.44■■□□□ 1.66
SMPD1-209ENST00000533196 JADE1Q6IE81 842 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 DSTYKQ6XUX3 929 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 NT5DC4Q86YG4 428 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 FAM212AQ96EL1 285 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 CUEDC2Q9H467 287 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 CYP4F11Q9HBI6 524 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 NUMBLQ9Y6R0 609 aa25.44■■□□□ 1.66
SMPD1-209ENST00000533196 NARSO43776 548 aaKnown RBP25.43■■□□□ 1.66
SMPD1-209ENST00000533196 HSP90AA1P07900 732 aaKnown RBP25.43■■□□□ 1.66
SMPD1-209ENST00000533196 ACOT2P49753 483 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 USP37Q86T82 979 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 TMEM105Q8N8V8 129 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 POMGNT1Q8WZA1 660 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 TNMDQ9H2S6 317 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 SLC2A4RGQ9NR83 387 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 INSL5Q9Y5Q6 135 aa25.43■■□□□ 1.66
SMPD1-209ENST00000533196 SCN1AP35498 2009 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 WDFY4Q6ZS81 3184 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 A0A087X0B3 334 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 OR6C75A6NL08 312 aa25.42■■□□□ 1.66
SMPD1-209ENST00000533196 PIRO00625 290 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms