RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SSU72P8A0A1W2PR75 194 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 N4BP1O75113 896 aaKnown RBP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 PARNO95453 639 aaKnown RBP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 CXCL10P02778 98 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ITGA4P13612 1032 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 KLHL30Q0D2K2 578 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 SPA17Q15506 151 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 DUOXA2Q1HG44 320 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ZACNQ401N2 412 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 GLRA4Q5JXX5 417 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ALKAL1Q6UXT8 129 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 IRF2BP2Q7Z5L9 587 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 JAKMIP2Q96AA8 810 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ZMAT2Q96NC0 199 aaKnown RBP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 PLEKHA5Q9HAU0 1116 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ZNF623O75123 536 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 LCA5LO95447 670 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 ATF7P17544 494 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-208ENST00000533123 CASQ1P31415 396 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 RAB27AP51159 221 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 CETN1Q12798 172 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 EPC2Q52LR7 807 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 CCDC122Q5T0U0 273 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 SLC24A5Q71RS6 500 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 MRPL10Q7Z7H8 261 aaKnown RBP19.89■□□□□ 0.77
SMPD1-208ENST00000533123 SEMA4DQ92854 862 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 KIF12Q96FN5 646 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 ZFP42Q96MM3 310 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 TSPYL2Q9H2G4 693 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-208ENST00000533123 HAUS4Q9H6D7 363 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 APEX2Q9UBZ4 518 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 DNAJC12Q9UKB3 198 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 DUSP10Q9Y6W6 482 aa19.89■□□□□ 0.77
SMPD1-208ENST00000533123 P4HA2O15460 535 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 TMEM191BP0C7N4 346 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 PHLDB3Q6NSJ2 640 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 AGMOQ6ZNB7 445 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 ECHDC2Q86YB7 292 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 HACE1Q8IYU2 909 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 EHBP1Q8NDI1 1231 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 ELMO3Q96BJ8 720 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 VWCEQ96DN2 955 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 PCDHA13Q9Y5I0 950 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 ALPK3Q96L96 1907 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 C9IYK1 514 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 PMM2O15305 246 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 CSF2RAP15509 400 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 AFF1P51825 1210 aaKnown RBP19.88■□□□□ 0.77
SMPD1-208ENST00000533123 TMEM132DQ14C87 1099 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 TRAPPC11Q7Z392 1133 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 CD302Q8IX05 232 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 SLC35F6Q8N357 371 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 FBXL13Q8NEE6 735 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 APBB2Q92870 758 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 RAB20Q9NX57 234 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 CNTN3Q9P232 1028 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 COQ4Q9Y3A0 265 aa19.88■□□□□ 0.77
SMPD1-208ENST00000533123 F8VZ95 297 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 ENPP3O14638 875 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 PHACTR2O75167 634 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 URI1O94763 535 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-208ENST00000533123 VNN1O95497 513 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 CST3P01034 146 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-208ENST00000533123 MLH1P40692 756 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 VAV2P52735 878 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 AP3M2P53677 418 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 PTK2Q05397 1052 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 ANKRD36BP1Q96IX9 119 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 GAD1Q99259 594 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 GPR88Q9GZN0 384 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 MYO6Q9UM54 1294 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 C2CD2Q9Y426 696 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 SMIM28A0A1B0GU29 152 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 GFPT2O94808 682 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 TNNC2P02585 160 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 SKIP12755 728 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 GUCY2FP51841 1108 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 DRAP1Q14919 205 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-208ENST00000533123 ZNF571Q7Z3V5 609 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-208ENST00000533123 ARHGEF19Q8IW93 802 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 PI4K2AQ9BTU6 479 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 L2HGDHQ9H9P8 463 aa19.87■□□□□ 0.77
SMPD1-208ENST00000533123 CCDC85CA6NKD9 419 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 HLA-DRAP01903 254 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 XKR4Q5GH76 650 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 MFSD5Q6N075 450 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 ZNF598Q86UK7 904 aaKnown RBP19.86■□□□□ 0.77
SMPD1-208ENST00000533123 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMPD1-208ENST00000533123 STK33Q9BYT3 514 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 LAMA2P24043 3122 aaKnown RBP19.86■□□□□ 0.77
SMPD1-208ENST00000533123 A0A087X0T9 212 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 ARL5CA6NH57 179 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 FAM228BP0C875 321 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 PIK3CAP42336 1068 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 FAM189BP81408 668 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 ARHGAP44Q17R89 818 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 ZNF662Q6ZS27 426 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 C1orf127Q8N9H9 656 aa19.86■□□□□ 0.77
SMPD1-208ENST00000533123 GSTCDQ8NEC7 633 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms