RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 DDX12PQ92771 950 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 NKD2Q969F2 451 aaPredicted RBP19.41■□□□□ 0.7
PCF11-206ENST00000533018 FAM212AQ96EL1 285 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 SHDQ96IW2 340 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 SUSD3Q96L08 255 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 PARVGQ9HBI0 331 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 TBX20Q9UMR3 447 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 FAM186AA6NE01 2351 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 ARHGEF37A1IGU5 675 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 VPS37CA5D8V6 355 aaPredicted RBP19.4■□□□□ 0.7
PCF11-206ENST00000533018 SLC26A4O43511 780 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 TBCAO75347 108 aaKnown RBP19.4■□□□□ 0.7
PCF11-206ENST00000533018 CPB1P15086 417 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 PLCG1P19174 1290 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 LONP1P36776 959 aaKnown RBP19.4■□□□□ 0.7
PCF11-206ENST00000533018 TNFSF9P41273 254 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 ADCY1Q08828 1119 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 MRPL58Q14197 206 aaKnown RBP19.4■□□□□ 0.7
PCF11-206ENST00000533018 SF3A1Q15459 793 aaKnown RBP19.4■□□□□ 0.7
PCF11-206ENST00000533018 SLC5A9Q2M3M2 681 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 ELMOD1Q8N336 334 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 TMEM130Q8N3G9 435 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 HAPLN2Q9GZV7 340 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 PCDHB8Q9UN66 801 aa19.4■□□□□ 0.7
PCF11-206ENST00000533018 MIA3Q5JRA6 1907 aa19.39■□□□□ 0.7
PCF11-206ENST00000533018 PRR23AA6NEV1 266 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 TRAK2O60296 914 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 TBC1D4O60343 1298 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 SEC24AO95486 1093 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 GRIN1Q05586 938 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 KYAT1Q16773 422 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 TPGS2Q68CL5 300 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 DSTYKQ6XUX3 929 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 TCEAL8Q8IYN2 117 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 RAD54LQ92698 747 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 FOXQ1Q9C009 403 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 RPF1Q9H9Y2 349 aaKnown RBP19.39■□□□□ 0.69
PCF11-206ENST00000533018 GDE1Q9NZC3 331 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 UBQLN1Q9UMX0 589 aaKnown RBP19.39■□□□□ 0.69
PCF11-206ENST00000533018 TIMM13Q9Y5L4 95 aaPredicted RBP19.39■□□□□ 0.69
PCF11-206ENST00000533018 INSL5Q9Y5Q6 135 aa19.39■□□□□ 0.69
PCF11-206ENST00000533018 TTC26A0AVF1 554 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 LACTBL1A8MY62 500 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 XPOTO43592 962 aaKnown RBP19.38■□□□□ 0.69
PCF11-206ENST00000533018 PFKPQ01813 784 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 YWHAHQ04917 246 aaPredicted RBP19.38■□□□□ 0.69
PCF11-206ENST00000533018 SLC44A4Q53GD3 710 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 CYP4A22Q5TCH4 519 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 IQCEQ6IPM2 695 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 PDZD4Q76G19 769 aaPredicted RBP19.38■□□□□ 0.69
PCF11-206ENST00000533018 USP37Q86T82 979 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 KCNG4Q8TDN1 519 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 ZNF512Q96ME7 567 aaPredicted RBP19.38■□□□□ 0.69
PCF11-206ENST00000533018 MSTO1Q9BUK6 570 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 BLOC1S4Q9NUP1 217 aa19.38■□□□□ 0.69
PCF11-206ENST00000533018 AFF4Q9UHB7 1163 aaKnown RBP19.38■□□□□ 0.69
PCF11-206ENST00000533018 SPTBN4Q9H254 2564 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 TULP1O00294 542 aaPredicted RBP19.37■□□□□ 0.69
PCF11-206ENST00000533018 ZNF197O14709 1029 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 OGTO15294 1046 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 CEBPBP17676 345 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 SCP2P22307 547 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 GUCY2FP51841 1108 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 STARD6P59095 220 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 TWF1Q12792 350 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 UBXN2BQ14CS0 331 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 MLF2Q15773 248 aaPredicted RBP19.37■□□□□ 0.69
PCF11-206ENST00000533018 ZBTB41Q5SVQ8 909 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 RNF19BQ6ZMZ0 732 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 PJA1Q8NG27 643 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 LRRC15Q8TF66 581 aa19.37■□□□□ 0.69
PCF11-206ENST00000533018 LARP4BQ92615 738 aaKnown RBP19.37■□□□□ 0.69
PCF11-206ENST00000533018 CACNA1IQ9P0X4 2223 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 KANSL1LA0AUZ9 987 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 CYP3A5P20815 502 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 PDCP20941 246 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 NMT1P30419 496 aaKnown RBP19.36■□□□□ 0.69
PCF11-206ENST00000533018 LRPAP1P30533 357 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 ZNF131P52739 623 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 ENOX2Q16206 610 aaKnown RBP19.36■□□□□ 0.69
PCF11-206ENST00000533018 KRI1Q8N9T8 703 aaKnown RBP19.36■□□□□ 0.69
PCF11-206ENST00000533018 TCEAL4Q96EI5 215 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 PGLYRP2Q96PD5 576 aa19.36■□□□□ 0.69
PCF11-206ENST00000533018 AVENQ9NQS1 362 aaPredicted RBP19.36■□□□□ 0.69
PCF11-206ENST00000533018 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.36■□□□□ 0.69
PCF11-206ENST00000533018 A0A0B4J269 797 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 M0QZQ0 153 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 LRRN2O75325 713 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 ECI2O75521 394 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 PIGRP01833 764 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 CD72P21854 359 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 ABCD1P33897 745 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 DDIT3P35638 169 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 PRKCQQ04759 706 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 ZBTB6Q15916 424 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 TANGO2Q6ICL3 276 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 C1orf210Q8IVY1 113 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 EPSTI1Q96J88 318 aa19.35■□□□□ 0.69
PCF11-206ENST00000533018 BCO2Q9BYV7 579 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms