RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 MBTPS2O43462 519 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 GADD45BO75293 160 aaPredicted RBP23.78■■□□□ 1.4
PTPRK-222ENST00000532751 SMC2O95347 1197 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 GLUD1P00367 558 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 EPCAMP16422 314 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 IGFBP6P24592 240 aaPredicted RBP23.78■■□□□ 1.4
PTPRK-222ENST00000532751 GUCY2FP51841 1108 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 C12orf56Q8IXR9 622 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 XXYLT1Q8NBI6 393 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 LNX1Q8TBB1 728 aaPredicted RBP23.78■■□□□ 1.4
PTPRK-222ENST00000532751 IPO9Q96P70 1041 aaKnown RBP23.78■■□□□ 1.4
PTPRK-222ENST00000532751 DPP3Q9NY33 737 aa23.78■■□□□ 1.4
PTPRK-222ENST00000532751 SPTBN5Q9NRC6 3674 aaKnown RBP23.78■■□□□ 1.4
PTPRK-222ENST00000532751 C1RP00736 705 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 PAX3P23760 479 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 TKTP29401 623 aaKnown RBP23.77■■□□□ 1.4
PTPRK-222ENST00000532751 CYP2J2P51589 502 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 ANKS3Q6ZW76 656 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 GLYCTKQ8IVS8 523 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 EFCAB13Q8IY85 973 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 ELOA2Q8IYF1 753 aaPredicted RBP23.77■■□□□ 1.4
PTPRK-222ENST00000532751 SMRP1Q8NCR6 262 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 ADAMTS19Q8TE59 1207 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 SUSD3Q96L08 255 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 FBXL18Q96ME1 805 aa23.77■■□□□ 1.4
PTPRK-222ENST00000532751 PDXKO00764 312 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 IL9P15248 144 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 RPL17P18621 184 aaKnown RBP23.76■■□□□ 1.39
PTPRK-222ENST00000532751 UBE2HP62256 183 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 TFAMQ00059 246 aaKnown RBP23.76■■□□□ 1.39
PTPRK-222ENST00000532751 C9orf57Q5W0N0 161 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 CBWD2Q8IUF1 395 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 APPL2Q8NEU8 664 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 GSDMAQ96QA5 445 aa23.76■■□□□ 1.39
PTPRK-222ENST00000532751 H7C4K7 107 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 PIRO00625 290 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 CALUO43852 315 aaPredicted RBP23.75■■□□□ 1.39
PTPRK-222ENST00000532751 EXOC3O60645 756 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 SNRNP35Q16560 246 aaKnown RBP23.75■■□□□ 1.39
PTPRK-222ENST00000532751 CES5AQ6NT32 575 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 SYCE2Q6PIF2 218 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 DSTYKQ6XUX3 929 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 PALB2Q86YC2 1186 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 TMEM130Q8N3G9 435 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 RDH13Q8NBN7 331 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 SMARCE1Q969G3 411 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 KCTD10Q9H3F6 313 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 PDE11AQ9HCR9 933 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 MTRRQ9UBK8 725 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 PCDHB8Q9UN66 801 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 SCN1AP35498 2009 aa23.75■■□□□ 1.39
PTPRK-222ENST00000532751 ANO9A1A5B4 782 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 ARHGEF37A1IGU5 675 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 M0QZQ0 153 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 TMEM191BP0C7N4 346 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 ITIH3Q06033 890 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 SMAD2Q15796 467 aaKnown RBP23.74■■□□□ 1.39
PTPRK-222ENST00000532751 VARS2Q5ST30 1063 aaKnown RBP23.74■■□□□ 1.39
PTPRK-222ENST00000532751 GUF1Q8N442 669 aaKnown RBP23.74■■□□□ 1.39
PTPRK-222ENST00000532751 HDAC7Q8WUI4 952 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 ANKRD36BP1Q96IX9 119 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 ZNF560Q96MR9 790 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 UHRF1Q96T88 793 aaPredicted RBP23.74■■□□□ 1.39
PTPRK-222ENST00000532751 CLSTN3Q9BQT9 956 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 GTPBP4Q9BZE4 634 aaKnown RBP23.74■■□□□ 1.39
PTPRK-222ENST00000532751 SFXN1Q9H9B4 322 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 MAN1C1Q9NR34 630 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 BACE2Q9Y5Z0 518 aa23.74■■□□□ 1.39
PTPRK-222ENST00000532751 PRPF40AO75400 957 aaKnown RBP23.73■■□□□ 1.39
PTPRK-222ENST00000532751 AARSP49588 968 aaKnown RBP eCLIP23.73■■□□□ 1.39
PTPRK-222ENST00000532751 TAF6P49848 677 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 WNT7BP56706 349 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 LILRA4P59901 499 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 SLC9A9Q8IVB4 645 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 FNBP1Q96RU3 617 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 APOL5Q9BWW9 433 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 COL25A1Q9BXS0 654 aaPredicted RBP23.73■■□□□ 1.39
PTPRK-222ENST00000532751 S1PR5Q9H228 398 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 PLEKHA4Q9H4M7 779 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 R3HCC1Q9Y3T6 440 aaKnown RBP23.73■■□□□ 1.39
PTPRK-222ENST00000532751 USP15Q9Y4E8 981 aaPredicted RBP23.73■■□□□ 1.39
PTPRK-222ENST00000532751 PCDHA5Q9Y5H7 936 aa23.73■■□□□ 1.39
PTPRK-222ENST00000532751 XIRP2A4UGR9 3374 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 PPEF2O14830 753 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 TGM5O43548 720 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 TNNC2P02585 160 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 PNPLA4P41247 253 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 MYBPC2Q14324 1141 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 RARS2Q5T160 578 aaKnown RBP23.72■■□□□ 1.39
PTPRK-222ENST00000532751 ZNF658Q5TYW1 1059 aaPredicted RBP23.72■■□□□ 1.39
PTPRK-222ENST00000532751 ZNF280DQ6N043 979 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 USP37Q86T82 979 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 ADAM7Q9H2U9 754 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 INTS13Q9NVM9 706 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 PRKAG3Q9UGI9 489 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 ITGA11Q9UKX5 1188 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 MAPK8IP1Q9UQF2 711 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 TRAF3IP3Q9Y228 551 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 CDY1Q9Y6F8 540 aa23.72■■□□□ 1.39
PTPRK-222ENST00000532751 NR3C1P04150 777 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms