RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 KRT13P13646 458 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 IRS1P35568 1242 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 BFSP1Q12934 665 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ZSCAN23Q3MJ62 389 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FILIP1Q7Z7B0 1213 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DDX53Q86TM3 631 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 AUTS2Q8WXX7 1259 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CEP63Q96MT8 703 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 COL6A3P12111 3177 aa12.88□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CARNS1A5YM72 827 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PIRO00625 290 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CST3P01034 146 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FOXR2Q6PJQ5 311 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TRAPPC11Q7Z392 1133 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TMC7Q7Z402 723 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SIX4Q9UIU6 781 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 C2CD2LO14523 706 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SPTLC1O15269 473 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 EFEMP2O95967 443 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CA8P35219 290 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CLDN10P78369 228 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 UBE3AQ05086 875 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CCDC40Q4G0X9 1142 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ANO6Q4KMQ2 910 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TIGD5Q53EQ6 642 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FAM171A1Q5VUB5 890 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CEP57Q86XR8 500 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
TRAF3IP2-212ENST00000532708 C4BPAP04003 597 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 GCLMP48507 274 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 LILRA4P59901 499 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 BIRC3Q13489 604 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TCERG1LQ5VWI1 586 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PLPP4Q5VZY2 271 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 RNF168Q8IYW5 571 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MICALL1Q8N3F8 863 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ELMO3Q96BJ8 720 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 MRPL38Q96DV4 380 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAF3IP2-212ENST00000532708 IKBKBO14920 756 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PHACTR2O75167 634 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CXCL14O95715 111 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SOD2P04179 222 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TKTP29401 623 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 RBP5P82980 135 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 PTPROQ16827 1216 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SV2AQ7L0J3 742 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 USP37Q86T82 979 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ATG2AQ2TAZ0 1938 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 VWA8A3KMH1 1905 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 HIDE1A8MVS5 230 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 CTSAP10619 480 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 FOSL2P15408 326 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 RTP2Q5QGT7 225 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-212ENST00000532708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.357e-11■■■■■ 260.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms