RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 C12orf60Q5U649 245 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CYFIP1Q7L576 1253 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 G2E3Q7L622 706 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 LRRC17Q8N6Y2 441 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 OTUD5Q96G74 571 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF408Q9H9D4 720 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PHF11Q9UIL8 331 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 TSR3Q9UJK0 312 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 V9GYQ6 96 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PARD3Q8TEW0 1356 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ABCC5O15440 1437 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CLIC2O15247 247 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CHN1P15882 459 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CYP2C19P33261 490 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 GJA8P48165 433 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 USP14P54578 494 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 LRRC63Q05C16 580 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ME3Q16798 604 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 DGKHQ86XP1 1220 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 FANCBQ8NB91 859 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SUN5Q8TC36 379 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZFRQ96KR1 1074 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CCDC115Q96NT0 180 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PCIF1Q9H4Z3 704 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 GGA1Q9UJY5 639 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SYNPO2Q9UMS6 1093 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 MTMR6Q9Y217 621 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CHKBQ9Y259 395 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 IFNA14P01570 189 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CLTBP09497 229 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF806P0C7X5 589 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SDC4P31431 198 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF394Q53GI3 561 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SCARA3Q6AZY7 606 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CMTM6Q9NX76 183 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 WDR17Q8IZU2 1322 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 A0A0G2JPF8 293 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 TRPC5OSA6NMA1 111 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF879B4DU55 563 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 HNRNPCL3B7ZW38 293 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 KPNA5O15131 536 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 HNRNPCL4P0DMR1 293 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 CRKP46108 304 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PPARAQ07869 468 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SLC39A14Q15043 492 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 TSHZ1Q6ZSZ6 1077 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SYDE1Q6ZW31 735 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 THEM5Q8N1Q8 247 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 SHCBP1Q8NEM2 672 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 PHACTR1Q9C0D0 580 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 EHD1Q9H4M9 534 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 RPF1Q9H9Y2 349 aaKnown RBP8.49□□□□□ -1.05
CTNND1-231ENST00000532463 DYRK4Q9NR20 520 aa8.49□□□□□ -1.05
CTNND1-231ENST00000532463 FAM47DPA6NHR8 397 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 PSMD3O43242 534 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 PGK2P07205 417 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 FAM58BPP0C7Q3 252 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 OLR1P78380 273 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 BST2Q10589 180 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 POLA2Q14181 598 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 DPCR1Q3MIW9 517 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 ZNF667Q5HYK9 610 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 PCNX4Q63HM2 1172 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 OLFML2AQ68BL7 652 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 CCSAPQ6IQ19 270 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 TXNDC11Q6PKC3 985 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 PROSER1Q86XN7 944 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 GSPT2Q8IYD1 628 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 SYTL1Q8IYJ3 562 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 S100A13Q99584 98 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 KLHL4Q9C0H6 718 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 KLHL1Q9NR64 748 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 EMILIN3Q9NT22 766 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 DSEQ9UL01 958 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 RTCBQ9Y3I0 505 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 WWP2O00308 870 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 SSNA1O43805 119 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 TPST1O60507 370 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 KPNA6O60684 536 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 SOX11P35716 441 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 EIF3EP60228 445 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 LRRC41Q15345 812 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 TMEM63BQ5T3F8 832 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 MIS18BP1Q6P0N0 1132 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 PRMT9Q6P2P2 845 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 MZT2AQ6P582 158 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 TRIM65Q6PJ69 517 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 CCDC137Q6PK04 289 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 COLGALT2Q8IYK4 626 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 KIF2BQ8N4N8 673 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 CCDC185Q8N715 623 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 OR6B3Q8NGW1 331 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 SYTL5Q8TDW5 730 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 THUMPD3Q9BV44 507 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 ZCCHC17Q9NP64 241 aaKnown RBP8.48□□□□□ -1.05
CTNND1-231ENST00000532463 RPS6KB2Q9UBS0 482 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 PKP3Q9Y446 797 aa8.48□□□□□ -1.05
CTNND1-231ENST00000532463 RALGAPBQ86X10 1494 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms