RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	BRSK2	Q8IWQ3	736 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	BEST2	Q8NFU1	509 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	SUSD3	Q96L08	255 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	TSPAN18	Q96SJ8	248 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	RBAK	Q9NYW8	714 aa	Predicted RBP	18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	HSPBP1	Q9NZL4	362 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	DERA	Q9Y315	318 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	C2CD2	Q9Y426	696 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	NCOR1	O75376	2440 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	GOLGA6L4	A6NEF3	574 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	SPDYE4	A6NLX3	237 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	SPTLC1	O15269	473 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	XPOT	O43592	962 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	RFPL2	O75678	378 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	RPN1	P04843	607 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	OR1D2	P34982	312 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	POU5F1	Q01860	360 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	CREM	Q03060	361 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	ITIH3	Q06033	890 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	SNW1	Q13573	536 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	BMT2	Q1RMZ1	405 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	VARS2	Q5ST30	1063 aa	Known RBP	18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	C9orf57	Q5W0N0	161 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	SCARA3	Q6AZY7	606 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	SFXN1	Q9H9B4	322 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	PDE11A	Q9HCR9	933 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	MTRR	Q9UBK8	725 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	PRKAG3	Q9UGI9	489 aa		18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	TIMM13	Q9Y5L4	95 aa	Predicted RBP	18.88	■□□□□ 0.61
CTSB-223	ENST00000532370	C19orf67	A6NJJ6	358 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	UBE4B	O95155	1302 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	IL18RAP	O95256	599 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	LDHA	P00338	332 aa	Known RBP	18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	MYL1	P05976	194 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	ANP32A	P39687	249 aa	Known RBP	18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	CYP2J2	P51589	502 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	KNOP1	Q1ED39	458 aa	Known RBP	18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	CES5A	Q6NT32	575 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	PDXDC1	Q6P996	788 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	ANKS3	Q6ZW76	656 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	GPD1L	Q8N335	351 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	KREMEN2	Q8NCW0	462 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	ENGASE	Q8NFI3	743 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	RPGRIP1	Q96KN7	1286 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	PHF7	Q9BWX1	381 aa	Predicted RBP	18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	POMK	Q9H5K3	350 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	DPP3	Q9NY33	737 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	CDY1	Q9Y6F8	540 aa		18.87	■□□□□ 0.61
CTSB-223	ENST00000532370	CCDC195	A0A1B0GUA6	201 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	ANO9	A1A5B4	782 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370		M0QZQ0	153 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	PIR	O00625	290 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	SYN3	O14994	580 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	SP100	P23497	879 aa	Predicted RBP	18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	AARS	P49588	968 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	LILRA4	P59901	499 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	TFAM	Q00059	246 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	PSMD2	Q13200	908 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	MRPL58	Q14197	206 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	LMBRD2	Q68DH5	695 aa	Predicted RBP	18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	RDH13	Q8NBN7	331 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	PCDHB8	Q9UN66	801 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	BACE2	Q9Y5Z0	518 aa		18.86	■□□□□ 0.61
CTSB-223	ENST00000532370	TBC1D4	O60343	1298 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	GADD45B	O75293	160 aa	Predicted RBP	18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	ARPP19	P56211	112 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	PNOC	Q13519	176 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	RAB33A	Q14088	237 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	ATAT1	Q5SQI0	421 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	HS2ST1	Q7LGA3	356 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	GPR149	Q86SP6	731 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	ZNF707	Q96C28	371 aa	Predicted RBP	18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	PLEKHA4	Q9H4M7	779 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	FBXW11	Q9UKB1	542 aa		18.85	■□□□□ 0.61
CTSB-223	ENST00000532370	TRIP11	Q15643	1979 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	PTPRJ	Q12913	1337 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	ZNF233	A6NK53	670 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	LOC730098	B7Z3J9	87 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	KIAA0391	O15091	583 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	RHOBTB3	O94955	611 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	C1R	P00736	705 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	FAM160A1	Q05DH4	1040 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	SLC8B1	Q6J4K2	584 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	DSTYK	Q6XUX3	929 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	C1orf127	Q8N9H9	656 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	APPL2	Q8NEU8	664 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	ERCC4	Q92889	916 aa	Predicted RBP	18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	SENP8	Q96LD8	212 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	RIPOR3	Q96MK2	946 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	POP1	Q99575	1024 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	TSHZ2	Q9NRE2	1034 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	CHMP5	Q9NZZ3	219 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	FBXL5	Q9UKA1	691 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	MAPK8IP1	Q9UQF2	711 aa		18.84	■□□□□ 0.61
CTSB-223	ENST00000532370	MTHFR	P42898	656 aa		18.83	■□□□□ 0.6
CTSB-223	ENST00000532370	SNRPF	P62306	86 aa	Known RBP	18.83	■□□□□ 0.6

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