RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, human

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSH3-208	ENST00000532181	SYCE2	Q6PIF2	218 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	DCLRE1A	Q6PJP8	1040 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	STXBP4	Q6ZWJ1	553 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	GUF1	Q8N442	669 aa	Known RBP	13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	BORCS6	Q96GS4	357 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	GSDMA	Q96QA5	445 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	MED15	Q96RN5	788 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	CDCA3	Q99618	268 aa	Predicted RBP	13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	NGRN	Q9NPE2	291 aa	Known RBP	13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	RBAK	Q9NYW8	714 aa	Predicted RBP	13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	MUTYH	Q9UIF7	546 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	SIX4	Q9UIU6	781 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	TRAF3IP3	Q9Y228	551 aa		13.36	□□□□□ -0.27
SSH3-208	ENST00000532181	PPP1R3G	B7ZBB8	358 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	TMEM189-UBE2V1	I3L0A0	370 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	PIR	O00625	290 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	PDXK	O00764	312 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	GPR37L1	O60883	481 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	NR3C1	P04150	777 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	WEE2	P0C1S8	567 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	FGFR3	P22607	806 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	SP100	P23497	879 aa	Predicted RBP	13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	TKT	P29401	623 aa	Known RBP	13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	DLG4	P78352	724 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	DSG1	Q02413	1049 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	MORC3	Q14149	939 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	TMEM132D	Q14C87	1099 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	KYAT1	Q16773	422 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	C1orf220	Q5T0J3	134 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	FAM171A1	Q5VUB5	890 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	C9orf57	Q5W0N0	161 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	RNF135	Q8IUD6	432 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	ADSSL1	Q8N142	457 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	C12orf76	Q8N812	135 aa	Predicted RBP	13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	C1orf127	Q8N9H9	656 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	SLC22A17	Q8WUG5	538 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	SMARCE1	Q969G3	411 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	RPGRIP1	Q96KN7	1286 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	MFSD14A	Q96MC6	490 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	KLHL5	Q96PQ7	755 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	S1PR5	Q9H228	398 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	CLSTN2	Q9H4D0	955 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	ASB7	Q9H672	318 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	UBQLN1	Q9UMX0	589 aa	Known RBP	13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	IRAK3	Q9Y616	596 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	VWA8	A3KMH1	1905 aa		13.35	□□□□□ -0.27
SSH3-208	ENST00000532181	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	TRIM49B	A6NDI0	452 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	ZNF233	A6NK53	670 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	DCX	O43602	365 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	CYP3A5	P20815	502 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	AARS	P49588	968 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	POU5F1	Q01860	360 aa	Known RBP	13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	CYP24A1	Q07973	514 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	SNRNP35	Q16560	246 aa	Known RBP	13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	ANKRD40	Q6AI12	368 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	CENPP	Q6IPU0	288 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	TMEM184A	Q6ZMB5	413 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	SLC9A9	Q8IVB4	645 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	CD302	Q8IX05	232 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	XXYLT1	Q8NBI6	393 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	LNX1	Q8TBB1	728 aa	Predicted RBP	13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	TMEM174	Q8WUU8	243 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	ELMO3	Q96BJ8	720 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	UROC1	Q96N76	676 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	RXFP1	Q9HBX9	757 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	SLC38A7	Q9NVC3	462 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	DERA	Q9Y315	318 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	HCFC2	Q9Y5Z7	792 aa		13.34	□□□□□ -0.27
SSH3-208	ENST00000532181	LOC730098	B7Z3J9	87 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	TULP1	O00294	542 aa	Predicted RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	TEX28	O15482	410 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	AKAP3	O75969	853 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	SMC2	O95347	1197 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	LDHA	P00338	332 aa	Known RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	ALAD	P13716	330 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	EPCAM	P16422	314 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	RPL9	P32969	192 aa	Known RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	SNRPF	P62306	86 aa	Known RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	TFAM	Q00059	246 aa	Known RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	PSMD6	Q15008	389 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	COBLL1	Q53SF7	1204 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	HS2ST1	Q7LGA3	356 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	CEP57	Q86XR8	500 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	GLYCTK	Q8IVS8	523 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	RIN2	Q8WYP3	895 aa	Predicted RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	SUSD6	Q92537	303 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	DDX27	Q96GQ7	796 aa	Known RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	SUSD3	Q96L08	255 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	DUSP9	Q99956	384 aa	Known RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	CLSTN3	Q9BQT9	956 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	MTMR12	Q9C0I1	747 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	INTS13	Q9NVM9	706 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	DPP3	Q9NY33	737 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	KIAA1468	Q9P260	1216 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	C2CD2	Q9Y426	696 aa		13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.33	□□□□□ -0.28
SSH3-208	ENST00000532181	SCN1A	P35498	2009 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms