RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 C8orf76Q96K31 380 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 ACAP3Q96P50 834 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 TRMT61BQ9BVS5 477 aaKnown RBP18.96■□□□□ 0.63
PKP3-208ENST00000531857 CHRDQ9H2X0 955 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 TMEM134Q9H6X4 195 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 CEP72Q9P209 647 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 LRWD1Q9UFC0 647 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 NUB1Q9Y5A7 615 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 NCANO14594 1321 aa18.96■□□□□ 0.63
PKP3-208ENST00000531857 E9PMD0 336 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 H7C4K7 107 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 ZNF197O14709 1029 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 HIP1RO75146 1068 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 MICAL2O94851 1124 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 PROZP22891 400 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 VIPR2P41587 438 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 CTXN3Q4LDR2 81 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 MAP4K3Q8IVH8 894 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 GPR161Q8N6U8 529 aaKnown RBP18.95■□□□□ 0.62
PKP3-208ENST00000531857 ZBTB45Q96K62 511 aaPredicted RBP18.95■□□□□ 0.62
PKP3-208ENST00000531857 MRPL4Q9BYD3 311 aaKnown RBP18.95■□□□□ 0.62
PKP3-208ENST00000531857 FOXP1Q9H334 677 aaPredicted RBP18.95■□□□□ 0.62
PKP3-208ENST00000531857 ZNF334Q9HCZ1 680 aaPredicted RBP18.95■□□□□ 0.62
PKP3-208ENST00000531857 PARD6AQ9NPB6 346 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 CNTN3Q9P232 1028 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 ARHGAP28Q9P2N2 729 aa18.95■□□□□ 0.62
PKP3-208ENST00000531857 MAN2B1O00754 1011 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 MCF2P10911 925 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 HARSP12081 509 aaKnown RBP18.94■□□□□ 0.62
PKP3-208ENST00000531857 GDI1P31150 447 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 RPL9P32969 192 aaKnown RBP18.94■□□□□ 0.62
PKP3-208ENST00000531857 TWF1Q12792 350 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 MAPK7Q13164 816 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 LPAL2Q16609 132 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 SEZ6Q53EL9 994 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 CYP4A22Q5TCH4 519 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 TPGS2Q68CL5 300 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 FAM3CQ92520 227 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 DDX12PQ92771 950 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 SMARCD2Q92925 531 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 IRF7Q92985 503 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 SECISBP2LQ93073 1101 aaKnown RBP18.94■□□□□ 0.62
PKP3-208ENST00000531857 SUSD3Q96L08 255 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 CNTNAP3BQ96NU0 1288 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 TCHPQ9BT92 498 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 RUSC1Q9BVN2 902 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 FAM126AQ9BYI3 521 aaPredicted RBP18.94■□□□□ 0.62
PKP3-208ENST00000531857 CNTNAP3Q9BZ76 1288 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 LMAN1LQ9HAT1 526 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 KMT5AQ9NQR1 393 aa18.94■□□□□ 0.62
PKP3-208ENST00000531857 NUP210Q8TEM1 1887 aaPredicted RBP18.93■□□□□ 0.62
PKP3-208ENST00000531857 PP2D1A8MPX8 630 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 MYL4P12829 197 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 PSMC3P17980 439 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 MCM4P33991 863 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 DMP1Q13316 513 aaPredicted RBP18.93■□□□□ 0.62
PKP3-208ENST00000531857 MPZL3Q6UWV2 235 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 RNF19BQ6ZMZ0 732 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 CCDC83Q8IWF9 413 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 SNX29Q8TEQ0 813 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 ZNF512Q96ME7 567 aaPredicted RBP18.93■□□□□ 0.62
PKP3-208ENST00000531857 AFF4Q9UHB7 1163 aaKnown RBP18.93■□□□□ 0.62
PKP3-208ENST00000531857 USP18Q9UMW8 372 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 PIAS3Q9Y6X2 628 aa18.93■□□□□ 0.62
PKP3-208ENST00000531857 KMT2BQ9UMN6 2715 aaPredicted RBP18.93■□□□□ 0.62
PKP3-208ENST00000531857 SFI1A8K8P3 1242 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 SLC16A4O15374 487 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 EPHA5P54756 1037 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 LMNB2Q03252 620 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 PDIA5Q14554 519 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 SLC10A6Q3KNW5 377 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 IQCEQ6IPM2 695 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 ZNF280DQ6N043 979 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 RINT1Q6NUQ1 792 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 MAMSTRQ6ZN01 415 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 KCNK18Q7Z418 384 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 ELMOD1Q8N336 334 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 IGSF22Q8N9C0 903 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 FBXO18Q8NFZ0 1043 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 ZSCAN18Q8TBC5 510 aaPredicted RBP18.92■□□□□ 0.62
PKP3-208ENST00000531857 TRPV5Q9NQA5 729 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 TUBGCP4Q9UGJ1 667 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 CDV3Q9UKY7 258 aaKnown RBP18.92■□□□□ 0.62
PKP3-208ENST00000531857 CACNA1BQ00975 2339 aa18.92■□□□□ 0.62
PKP3-208ENST00000531857 DCDC2BA2VCK2 349 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 PRR5-ARHGAP8B1AHC4 643 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 ARNTLO00327 626 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 VNN2O95498 520 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 SDHBP21912 280 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 CDC25AP30304 524 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 TOB1P50616 345 aaPredicted RBP18.91■□□□□ 0.62
PKP3-208ENST00000531857 ARHGAP8P85298 464 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 SPEM2Q0P670 501 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 PTGDRQ13258 359 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 GAS6Q14393 721 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 TEAD2Q15562 447 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 IL17AQ16552 155 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 C1orf186Q6ZWK4 172 aa18.91■□□□□ 0.62
PKP3-208ENST00000531857 SHKBP1Q8TBC3 707 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms