RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 POLIQ9UNA4 740 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 SIT1Q9Y3P8 196 aa19.52■□□□□ 0.72
PTPN11-204ENST00000531326 I3L4J1 428 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 XYLBO75191 536 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 POU2F2P09086 479 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 SLFN14P0C7P3 912 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 GLULP15104 373 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 TKTP29401 623 aaKnown RBP19.51■□□□□ 0.71
PTPN11-204ENST00000531326 BRCC3P46736 316 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 SOX4Q06945 474 aaPredicted RBP19.51■□□□□ 0.71
PTPN11-204ENST00000531326 DYMQ7RTS9 669 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 TAS1R3Q7RTX0 852 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 ENGASEQ8NFI3 743 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 DDX12PQ92771 950 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 DDX27Q96GQ7 796 aaKnown RBP19.51■□□□□ 0.71
PTPN11-204ENST00000531326 CDT1Q9H211 546 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 MAGEF1Q9HAY2 307 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 PTPRHQ9HD43 1115 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
PTPN11-204ENST00000531326 USP25Q9UHP3 1055 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 TNFSF13BQ9Y275 285 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 CDY1Q9Y6F8 540 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 FRYLO94915 3013 aa19.51■□□□□ 0.71
PTPN11-204ENST00000531326 SMIM28A0A1B0GU29 152 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 K7ERI5 159 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 LRRN2O75325 713 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 KRT18P05783 430 aaKnown RBP19.5■□□□□ 0.71
PTPN11-204ENST00000531326 PLS3P13797 630 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 NPTX2P47972 431 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 ZNF131P52739 623 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 PEX3P56589 373 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 STARD6P59095 220 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 SNW1Q13573 536 aaKnown RBP19.5■□□□□ 0.71
PTPN11-204ENST00000531326 UVSSAQ2YD98 709 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 XKR4Q5GH76 650 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 ALKAL1Q6UXT8 129 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 FMR1NBQ8N0W7 255 aaPredicted RBP19.5■□□□□ 0.71
PTPN11-204ENST00000531326 PJA1Q8NG27 643 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 UROC1Q96N76 676 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 ACO2Q99798 780 aaKnown RBP19.5■□□□□ 0.71
PTPN11-204ENST00000531326 C17orf75Q9HAS0 396 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 R4GN57 208 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 ZNF292O60281 2723 aa19.5■□□□□ 0.71
PTPN11-204ENST00000531326 CACNA1IQ9P0X4 2223 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 DMXL1Q9Y485 3027 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 FANCMQ8IYD8 2048 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 MIA3Q5JRA6 1907 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
PTPN11-204ENST00000531326 ZNF202O95125 648 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 GRM5P41594 1212 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 POTEHQ6S545 545 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 MTSS1LQ765P7 747 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 NPAS3Q8IXF0 933 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 GRAMD1CQ8IYS0 662 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 CEP57L1Q8IYX8 460 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 ZMAT2Q96NC0 199 aaKnown RBP19.49■□□□□ 0.71
PTPN11-204ENST00000531326 TRIM9Q9C026 710 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 ARHGAP28Q9P2N2 729 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 BACE2Q9Y5Z0 518 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 PHLPP2Q6ZVD8 1323 aa19.49■□□□□ 0.71
PTPN11-204ENST00000531326 CCDC169A6NNP5 214 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 FAM13AO94988 1023 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 OSTNP61366 133 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 UBE2HP62256 183 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 FAM160A1Q05DH4 1040 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 DMP1Q13316 513 aaPredicted RBP19.48■□□□□ 0.71
PTPN11-204ENST00000531326 PABPC1LQ4VXU2 614 aaKnown RBP19.48■□□□□ 0.71
PTPN11-204ENST00000531326 CNNM4Q6P4Q7 775 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 KRBA2Q6ZNG9 492 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 ANKS3Q6ZW76 656 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 C1orf210Q8IVY1 113 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 SPIRE2Q8WWL2 714 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 ING5Q8WYH8 240 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 PAGE5Q96GU1 130 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 GBP4Q96PP9 640 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 FIZ1Q96SL8 496 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 C7orf25Q9BPX7 421 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 KXD1Q9BQD3 176 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 TARS2Q9BW92 718 aaKnown RBP19.48■□□□□ 0.71
PTPN11-204ENST00000531326 LRRC27Q9C0I9 530 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 TMEM134Q9H6X4 195 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 PARVGQ9HBI0 331 aa19.48■□□□□ 0.71
PTPN11-204ENST00000531326 EP300Q09472 2414 aaPredicted RBP19.47■□□□□ 0.71
PTPN11-204ENST00000531326 CITO14578 2027 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 FRMD3A2A2Y4 597 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 ABLIM1O14639 778 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 MEFVO15553 781 aaPredicted RBP19.47■□□□□ 0.71
PTPN11-204ENST00000531326 TRAPPC3O43617 180 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 TBCAO75347 108 aaKnown RBP19.47■□□□□ 0.71
PTPN11-204ENST00000531326 SP9P0CG40 484 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 CASP1P29466 404 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 AFMP43652 599 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 AMPD3Q01432 767 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 SLC5A9Q2M3M2 681 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 ZNF568Q3ZCX4 644 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 RTL10Q7L3V2 364 aa19.47■□□□□ 0.71
PTPN11-204ENST00000531326 APBB1IPQ7Z5R6 666 aaPredicted RBP19.47■□□□□ 0.71
PTPN11-204ENST00000531326 MAML2Q8IZL2 1156 aaPredicted RBP19.47■□□□□ 0.71
PTPN11-204ENST00000531326 NTPCRQ9BSD7 190 aaKnown RBP19.47■□□□□ 0.71
PTPN11-204ENST00000531326 DDX23Q9BUQ8 820 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms