RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 MCRS1Q96EZ8 462 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 BCO2Q9BYV7 579 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 PLEKHA5Q9HAU0 1116 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 CYP4F11Q9HBI6 524 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 LTB4R2Q9NPC1 389 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 TUBGCP4Q9UGJ1 667 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
VPS28-214ENST00000531032 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
VPS28-214ENST00000531032 EP300Q09472 2414 aaPredicted RBP12.39□□□□□ -0.43
VPS28-214ENST00000531032 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 H0YCG3 227 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 M0QZQ0 153 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 ZNF197O14709 1029 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 PLA2G4BP0C869 781 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 CXCL8P10145 99 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 FCARP24071 287 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 LRPAP1P30533 357 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 CCR2P41597 374 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 MAGEA9P43362 315 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 NCKAP1LP55160 1127 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 ARPP19P56211 112 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 ADCY1Q08828 1119 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 UBXN2BQ14CS0 331 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 ARSHQ5FYA8 562 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 TCEAL4Q96EI5 215 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 CDK5RAP3Q96JB5 506 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 PLIN2Q99541 437 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 CORO1BQ9BR76 489 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 PLA2G2FQ9BZM2 168 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
VPS28-214ENST00000531032 LARSQ9P2J5 1176 aaKnown RBP12.38□□□□□ -0.43
VPS28-214ENST00000531032 AFF4Q9UHB7 1163 aaKnown RBP12.38□□□□□ -0.43
VPS28-214ENST00000531032 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
VPS28-214ENST00000531032 FRYLO94915 3013 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 COL4A2P08572 1712 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 OTOGLQ3ZCN5 2332 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 DMXL1Q9Y485 3027 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 NPHP3-ACAD11A0A0J9YXS1 232 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 FAM170BA6NMN3 283 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 NRG2O14511 850 aaPredicted RBP12.37□□□□□ -0.43
VPS28-214ENST00000531032 SLC26A4O43511 780 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 FAM189A1O60320 539 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 OAZ2O95190 189 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 CLTAP09496 248 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 CYP3A5P20815 502 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 CD72P21854 359 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 TARSP26639 723 aaKnown RBP12.37□□□□□ -0.43
VPS28-214ENST00000531032 GJB2P29033 226 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.431e-6■■■■■ 36.1
VPS28-214ENST00000531032 EPHA5P54756 1037 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 ZBTB6Q15916 424 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 KYAT1Q16773 422 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 ZNF528Q3MIS6 628 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 FAM78AQ5JUQ0 283 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 ZBTB41Q5SVQ8 909 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 PDZD4Q76G19 769 aaPredicted RBP12.37□□□□□ -0.43
VPS28-214ENST00000531032 BEST2Q8NFU1 509 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 DNASE1L2Q92874 299 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 CLDN23Q96B33 292 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 AK8Q96MA6 479 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 ZFP14Q9HCL3 533 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 SPATA6Q9NWH7 488 aaPredicted RBP12.37□□□□□ -0.43
VPS28-214ENST00000531032 CEP72Q9P209 647 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 FBXO4Q9UKT5 387 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 ODF2LQ9ULJ1 636 aa12.37□□□□□ -0.43
VPS28-214ENST00000531032 SHISA7A6NL88 538 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 H3BQV1 296 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 LAMTOR5O43504 91 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 MOSPD3O75425 235 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
VPS28-214ENST00000531032 PIGRP01833 764 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 ADRB2P07550 413 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 SCP2P22307 547 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 TNFSF9P41273 254 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 RPS9P46781 194 aaKnown RBP12.36□□□□□ -0.43
VPS28-214ENST00000531032 ID4P47928 161 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 ZNF131P52739 623 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
VPS28-214ENST00000531032 YWHAHQ04917 246 aaPredicted RBP12.36□□□□□ -0.43
VPS28-214ENST00000531032 PPP2R3AQ06190 1150 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 SPAG1Q07617 926 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 TWF1Q12792 350 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 IQCEQ6IPM2 695 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 RNF19BQ6ZMZ0 732 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 HAUS6Q7Z4H7 955 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 ELMOD1Q8N336 334 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 TMEM130Q8N3G9 435 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
VPS28-214ENST00000531032 LRRC15Q8TF66 581 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms