RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 ARPP19P56211 112 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 TDGQ13569 410 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 ALCAMQ13740 583 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 TMEM132DQ14C87 1099 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 ZBTB6Q15916 424 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 UVSSAQ2YD98 709 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 FOXD4L6Q3SYB3 417 aaPredicted RBP14.46□□□□□ -0.09
VPS28-211ENST00000530790 CTXN3Q4LDR2 81 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 L1TD1Q5T7N2 865 aaKnown RBP14.46□□□□□ -0.09
VPS28-211ENST00000530790 JADE1Q6IE81 842 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 FOXD4L3Q6VB84 417 aaPredicted RBP14.46□□□□□ -0.09
VPS28-211ENST00000530790 GRASPQ7Z6J2 395 aaPredicted RBP14.46□□□□□ -0.09
VPS28-211ENST00000530790 BEST2Q8NFU1 509 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 KCNG4Q8TDN1 519 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 POMGNT1Q8WZA1 660 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 ACCSQ96QU6 501 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 MYADMQ96S97 322 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 TNMDQ9H2S6 317 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 KCNK12Q9HB15 430 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 PANK4Q9NVE7 773 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 IGSF9Q9P2J2 1179 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 DUSP12Q9UNI6 340 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 STYXL1Q9Y6J8 313 aa14.46□□□□□ -0.09
VPS28-211ENST00000530790 FRMD3A2A2Y4 597 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 WDR27A2RRH5 827 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 PRRG1O14668 218 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 CUTAO60888 179 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 ADRB2P07550 413 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 NFICP08651 508 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 ELF1P32519 619 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 GUCY2FP51841 1108 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 POSTNQ15063 836 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 SPATA1Q5VX52 437 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 CCDC65Q8IXS2 484 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 SYCP3Q8IZU3 236 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 TMEM130Q8N3G9 435 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 SPRYD3Q8NCJ5 442 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 ZNF461Q8TAF7 563 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 DHX58Q96C10 678 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 STRA6Q9BX79 667 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 LRRC27Q9C0I9 530 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 CUEDC2Q9H467 287 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 ASB7Q9H672 318 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 FBXL5Q9UKA1 691 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 DERAQ9Y315 318 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 PCDHB13Q9Y5F0 798 aa14.45□□□□□ -0.1
VPS28-211ENST00000530790 MTCL1Q9Y4B5 1905 aaKnown RBP14.45□□□□□ -0.1
VPS28-211ENST00000530790 M0QZQ0 153 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 TBC1D4O60343 1298 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 LRG1P02750 347 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 LAMP2P13473 410 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 CPB1P15086 417 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 ATF2P15336 505 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 ME1P48163 572 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 AARSP49588 968 aaKnown RBP eCLIP14.44□□□□□ -0.1
VPS28-211ENST00000530790 CASP5P51878 434 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 NTHL1P78549 312 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 YWHAHQ04917 246 aaPredicted RBP14.44□□□□□ -0.1
VPS28-211ENST00000530790 KCNA1Q09470 495 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 MRPL58Q14197 206 aaKnown RBP14.44□□□□□ -0.1
VPS28-211ENST00000530790 E2F4Q16254 413 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 PABPC1LQ4VXU2 614 aaKnown RBP14.44□□□□□ -0.1
VPS28-211ENST00000530790 TPGS2Q68CL5 300 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 DSTYKQ6XUX3 929 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 STXBP4Q6ZWJ1 553 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 USP37Q86T82 979 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 IQUBQ8NA54 791 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 NXPE3Q969Y0 559 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 IKZF4Q9H2S9 585 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 MFSD1Q9H3U5 465 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 C2CD2Q9Y426 696 aa14.44□□□□□ -0.1
VPS28-211ENST00000530790 ZFP37Q9Y6Q3 630 aaPredicted RBP14.44□□□□□ -0.1
VPS28-211ENST00000530790 ABLIM3O94929 683 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 IL18RAPO95256 599 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 PDGFBP01127 241 aaPredicted RBP14.43□□□□□ -0.1
VPS28-211ENST00000530790 ODC1P11926 461 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 PAX3P23760 479 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 ADSSP30520 456 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 AMPD3Q01432 767 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 POU5F1Q01860 360 aaKnown RBP14.43□□□□□ -0.1
VPS28-211ENST00000530790 PKP1Q13835 747 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 ATL3Q6DD88 541 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 SHC4Q6S5L8 630 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 PRRX2Q99811 253 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 OXCT2Q9BYC2 517 aaPredicted RBP14.43□□□□□ -0.1
VPS28-211ENST00000530790 FGFBP2Q9BYJ0 223 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 MAGEF1Q9HAY2 307 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 CYP4F11Q9HBI6 524 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 KBTBD4Q9NVX7 518 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 HCFC1R1Q9NWW0 138 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 FBXL21Q9UKT6 434 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 CDH7Q9ULB5 785 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 INSL5Q9Y5Q6 135 aa14.43□□□□□ -0.1
VPS28-211ENST00000530790 ARHGEF37A1IGU5 675 aa14.42□□□□□ -0.1
VPS28-211ENST00000530790 PPEF2O14830 753 aa14.42□□□□□ -0.1
VPS28-211ENST00000530790 VCPP55072 806 aaKnown RBP14.42□□□□□ -0.1
VPS28-211ENST00000530790 ASIC1P78348 528 aa14.42□□□□□ -0.1
VPS28-211ENST00000530790 HTR4Q13639 388 aa14.42□□□□□ -0.1
VPS28-211ENST00000530790 C9orf57Q5W0N0 161 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms