RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 PPP1R9BQ96SB3 815 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 PRPF18Q99633 342 aaKnown RBP2.43□□□□□ -2.02
FGFR1-235ENST00000530701 C1orf43Q9BWL3 253 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 TRIM54Q9BYV2 358 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.43□□□□□ -2.02
FGFR1-235ENST00000530701 EPC1Q9H2F5 836 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 CNTD2Q9H8S5 307 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 SAYSD1Q9NPB0 183 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 HEYLQ9NQ87 328 aaPredicted RBP2.43□□□□□ -2.02
FGFR1-235ENST00000530701 A1CFQ9NQ94 594 aaKnown RBP2.43□□□□□ -2.02
FGFR1-235ENST00000530701 NECTIN3Q9NQS3 549 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 ITM2CQ9NQX7 267 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.43□□□□□ -2.02
FGFR1-235ENST00000530701 USP40Q9NVE5 1235 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 SIRT5Q9NXA8 310 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 COL20A1Q9P218 1284 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 KLHL14Q9P2G3 628 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 TRPS1Q9UHF7 1281 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 MED16Q9Y2X0 877 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 TMEM98Q9Y2Y6 226 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 RBM8AQ9Y5S9 174 aaKnown RBP2.43□□□□□ -2.02
FGFR1-235ENST00000530701 HCFC2Q9Y5Z7 792 aa2.43□□□□□ -2.02
FGFR1-235ENST00000530701 CCDC196A0A1B0GTZ2 297 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 FAM234BA2RU67 622 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 MBD3L4A6NDZ8 208 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 MBD3L3A6NE82 208 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 CLCA1A8K7I4 914 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 KIAA0391O15091 583 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 GRM6O15303 877 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 FIBPO43427 364 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ZNF500O60304 480 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SNX2O60749 519 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SOAT2O75908 522 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 PAPLNO95428 1278 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 EFEMP2O95967 443 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 IL18BPO95998 194 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 AMY1AP04745 511 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 JUNP05412 331 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 C8BP07358 591 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 GRPP07492 148 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 GJB1P08034 283 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 IFIT1P09914 478 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 RARBP10826 455 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 XRCC6P12956 609 aaKnown RBP eCLIP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ALAS1P13196 640 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ATP5JP18859 108 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 HDCP19113 662 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 CNTFP26441 200 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 IL1R2P27930 398 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 KIR2DL3P43628 341 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 PHKA1P46020 1223 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 CLNS1AP54105 237 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 EIF5P55010 431 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ITGA1P56199 1179 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 PSMC1P62191 440 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SETQ01105 290 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 GALNT1Q10472 559 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SP140Q13342 867 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 CTBP1Q13363 440 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ADAM15Q13444 863 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 MTM1Q13496 603 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 TRPC3Q13507 836 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 PTK2BQ14289 1009 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SLC29A2Q14542 456 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 EIF4HQ15056 248 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 RAB30Q15771 203 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ZMAT1Q5H9K5 638 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 FBXO47Q5MNV8 452 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 LCE2AQ5TA79 106 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 RETSATQ6NUM9 610 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 MZT2BQ6NZ67 158 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 FAM180BQ6P0A1 224 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 USP17L6PQ6QN14 398 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 MPZL3Q6UWV2 235 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 DSTYKQ6XUX3 929 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ZNF605Q86T29 641 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 STK32CQ86UX6 486 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 IRF2BP1Q8IU81 584 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 TRMT2AQ8IZ69 625 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 TMTC2Q8N394 836 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ZGPATQ8N5A5 531 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ESX1Q8N693 406 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SLC15A4Q8N697 577 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 CELF5Q8N6W0 485 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 DNAJC5GQ8N7S2 189 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 KYQ8NBH2 561 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 PLA2G15Q8NCC3 412 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 PIK3C3Q8NEB9 887 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 FBXO18Q8NFZ0 1043 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SMARCC2Q8TAQ2 1214 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 CYP2W1Q8TAV3 490 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 IPO4Q8TEX9 1081 aaKnown RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 LPPQ93052 612 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 NKD2Q969F2 451 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SPSB4Q96A44 273 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 ZBTB8AQ96BR9 441 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 SLC7A6OSQ96CW6 309 aaPredicted RBP2.42□□□□□ -2.02
FGFR1-235ENST00000530701 MRGPRX1Q96LB2 322 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 TIGD1Q96MW7 591 aa2.42□□□□□ -2.02
FGFR1-235ENST00000530701 NEUROD6Q96NK8 337 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms