RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 LMNB2Q03252 620 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 ITKQ08881 620 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 GPR162Q16538 588 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 CALR3Q96L12 384 aaKnown RBP13.08□□□□□ -0.32
SCN3B-206ENST00000530277 DHX35Q9H5Z1 703 aaKnown RBP13.08□□□□□ -0.32
SCN3B-206ENST00000530277 PFASO15067 1338 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 M0R2N6 131 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 CDR2Q01850 454 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 MAP7D3Q8IWC1 876 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 SLC17A8Q8NDX2 589 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 PRPF31Q8WWY3 499 aaKnown RBP13.08□□□□□ -0.32
SCN3B-206ENST00000530277 IDI2Q9BXS1 227 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
SCN3B-206ENST00000530277 HNRNPH1P31943 449 aaKnown RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 MYL6P60660 151 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 RRP1BQ14684 758 aaKnown RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 LGSNQ5TDP6 509 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 TMC3Q7Z5M5 1100 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 MCUQ8NE86 351 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 ACTRT1Q8TDG2 376 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 ECT2Q9H8V3 914 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PJA2O43164 708 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 LCP1P13796 627 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 CPA2P48052 419 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PGM5Q15124 567 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 LPAR1Q92633 364 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 TRABDQ9H4I3 376 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 WRAP73Q9P2S5 460 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 GTF3C4Q9UKN8 822 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 LDHAP00338 332 aaKnown RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PDHA1P08559 390 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 ETS1P14921 441 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 TCF7P36402 384 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PCGF5Q86SE9 256 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 SCYL1Q96KG9 808 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PARVAQ9NVD7 372 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 PPARGC1AQ9UBK2 798 aaKnown RBP13.07□□□□□ -0.32
SCN3B-206ENST00000530277 RIPK3Q9Y572 518 aa13.07□□□□□ -0.32
SCN3B-206ENST00000530277 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 AGPSO00116 658 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 VIL1P09327 827 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 NME3Q13232 169 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 SPARCL1Q14515 664 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 ACAD10Q6JQN1 1059 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 RAB6BQ9NRW1 208 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 UVRAGQ9P2Y5 699 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 CIB2O75838 187 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 PDGFRAP16234 1089 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 MAGEA4P43358 317 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 EIF3EP60228 445 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 HIF1AQ16665 826 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 GJC2Q5T442 439 aaPredicted RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 RAPH1Q70E73 1250 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 DTX3LQ8TDB6 740 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 SHCBP1LQ9BZQ2 653 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 PXMP2Q9NR77 195 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 DIS3Q9Y2L1 958 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 YDJCA8MPS7 323 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 CALRP27797 417 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 BCAR1P56945 870 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 KDM7AQ6ZMT4 941 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 NETO2Q8NC67 525 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 ERP27Q96DN0 273 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 VAV3Q9UKW4 847 aa13.06□□□□□ -0.32
SCN3B-206ENST00000530277 PRRC2BQ5JSZ5 2229 aaKnown RBP13.06□□□□□ -0.32
SCN3B-206ENST00000530277 MYH8P13535 1937 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 RBP3P10745 1247 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 ARL4CP56559 192 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 FBXO16Q8IX29 292 aaPredicted RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SEMA4DQ92854 862 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 P2RX7Q99572 595 aaKnown RBP13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SNX25Q9H3E2 840 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
SCN3B-206ENST00000530277 IP6K2Q9UHH9 426 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms