RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SOX9P48436 509 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 CCDC6Q16204 474 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 CSRP2Q16527 193 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 CYP4A22Q5TCH4 519 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 MAMSTRQ6ZN01 415 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 Q6ZS52 159 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 MCPH1Q8NEM0 835 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 TTC8Q8TAM2 541 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 DEPTORQ8TB45 409 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 SMARCD2Q92925 531 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 C2orf40Q9H1Z8 148 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 C2orf42Q9NWW7 574 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 INSL5Q9Y5Q6 135 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 FRYQ5TBA9 3013 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 ATG2BQ96BY7 2078 aa12.44□□□□□ -0.42
SF3B2-208ENST00000529994 GREB1Q4ZG55 1949 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 SLC38A8A6NNN8 435 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 NEMFO60524 1076 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 MOSPD3O75425 235 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 SPATA31C1P0DKV0 1188 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 ATF2P15336 505 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 MCM7P33993 719 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
SF3B2-208ENST00000529994 OSTNP61366 133 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 RABEP1Q15276 862 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 SF3A2Q15428 464 aaKnown RBP12.43□□□□□ -0.42
SF3B2-208ENST00000529994 SLC8B1Q6J4K2 584 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 CEP68Q76N32 757 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-208ENST00000529994 CEP120Q8N960 986 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 ZSCAN18Q8TBC5 510 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-208ENST00000529994 IER2Q9BTL4 223 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 SLITRK6Q9H5Y7 841 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-208ENST00000529994 CEP72Q9P209 647 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 BAHCC1Q9P281 2608 aa12.43□□□□□ -0.42
SF3B2-208ENST00000529994 CEP295Q9C0D2 2601 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 CITO14578 2027 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 SMIM28A0A1B0GU29 152 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 HEPACAM2A8MVW5 462 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 K7ESF4 209 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 MED24O75448 989 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 XRCC6P12956 609 aaKnown RBP eCLIP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 HMGN5P82970 282 aaKnown RBP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 TWF1Q12792 350 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 PTGDRQ13258 359 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 TEAD2Q15562 447 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 DCAF4L1Q3SXM0 396 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 AASDHQ4L235 1098 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 WDR44Q5JSH3 913 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 N4BP2L1Q5TBK1 243 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 ATF7IP2Q5U623 682 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 IL31Q6EBC2 164 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 IQCEQ6IPM2 695 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 LONP2Q86WA8 852 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 CATSPER3Q86XQ3 398 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 TCEAL8Q8IYN2 117 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 ELMOD1Q8N336 334 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 SPEM1Q8N4L4 309 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 CSGALNACT1Q8TDX6 532 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 RSPRY1Q96DX4 576 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 ZNF512Q96ME7 567 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 UROC1Q96N76 676 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
SF3B2-208ENST00000529994 TRPV5Q9NQA5 729 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 RXFP3Q9NSD7 469 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 FBXL5Q9UKA1 691 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 ANGPTL2Q9UKU9 493 aa12.42□□□□□ -0.42
SF3B2-208ENST00000529994 ARNTLO00327 626 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 PODXLO00592 558 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 AXIN1O15169 862 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 MICAL2O94851 1124 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 NAMPTP43490 491 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 KPNA1P52294 538 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-208ENST00000529994 ZNF174Q15697 407 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 PADI6Q6TGC4 694 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 MFSD6LQ8IWD5 586 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 YAF2Q8IY57 180 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 DEPDC1BQ8WUY9 529 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 ZMAT2Q96NC0 199 aaKnown RBP12.41□□□□□ -0.42
SF3B2-208ENST00000529994 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 TMEM60Q9H2L4 133 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 ASAH2Q9NR71 780 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 NUB1Q9Y5A7 615 aa12.41□□□□□ -0.42
SF3B2-208ENST00000529994 FAM208BQ5VWN6 2430 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 ARHGEF35A5YM69 484 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 H7C4K7 107 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
SF3B2-208ENST00000529994 CYP11B2P19099 503 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 PMLP29590 882 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
SF3B2-208ENST00000529994 LRRC32Q14392 662 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 TXNDC11Q6PKC3 985 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 RNF19BQ6ZMZ0 732 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms