RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RNF26Q9BY78 433 aaPredicted RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 FAM126AQ9BYI3 521 aaPredicted RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 POLR3FQ9H1D9 316 aaPredicted RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF334Q9HCZ1 680 aaPredicted RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 GJB4Q9NTQ9 266 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 POLR3BQ9NW08 1133 aaPredicted RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 BCCIPQ9P287 314 aaKnown RBP eCLIP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 KCNH3Q9ULD8 1083 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 GDAQ9Y2T3 454 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 NOTCH4Q99466 2003 aa3.9□□□□□ -1.79
PTPRC-213ENST00000529828 MTCL1Q9Y4B5 1905 aaKnown RBP3.9□□□□□ -1.79
PTPRC-213ENST00000529828 WDR27A2RRH5 827 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 K7ESF4 209 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 MAN2B1O00754 1011 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PRRG1O14668 218 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 GIPC1O14908 333 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ASAP2O43150 1006 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 B3GAT3O94766 335 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 SEC24AO95486 1093 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 TOP3BO95985 862 aaKnown RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 C1RP00736 705 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 THP07101 528 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 CHRNB1P11230 501 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 MYL4P12829 197 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 FGFR3P22607 806 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 CLCNKBP51801 687 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 KPNA1P52294 538 aaPredicted RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 RCAN1P53805 252 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ROR1Q01973 937 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 STK3Q13188 491 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 RAB33AQ14088 237 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 TFDP1Q14186 410 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PPP2R5DQ14738 602 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 EPHA7Q15375 998 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 NAB2Q15742 525 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 NPY5RQ15761 445 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PRSS36Q5K4E3 855 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 EEF1DP3Q658K8 133 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PSAPL1Q6NUJ1 521 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 TXNDC11Q6PKC3 985 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PDZD4Q76G19 769 aaPredicted RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 OTUD6AQ7L8S5 288 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 C4orf19Q8IY42 314 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 C12orf50Q8NA57 414 aaPredicted RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 C3orf58Q8NDZ4 430 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PIGOQ8TEQ8 1089 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 HAS1Q92839 578 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 RSPRY1Q96DX4 576 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 BORCS6Q96GS4 357 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ZFYVE19Q96K21 471 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ASB16Q96NS5 453 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 KIFC3Q9BVG8 833 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PDZD7Q9H5P4 517 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 SLITRK6Q9H5Y7 841 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 CYP4F11Q9HBI6 524 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ZFP14Q9HCL3 533 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 KCNMB3Q9NPA1 279 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 GDE1Q9NZC3 331 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 MTRRQ9UBK8 725 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ZMIZ1Q9ULJ6 1067 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PCDHGA10Q9Y5H3 936 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 VWA8A3KMH1 1905 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 NID2Q14112 1375 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 TICRRQ7Z2Z1 1910 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 A0A1B0GUA9 196 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 CCDC194A0A1B0GVG4 234 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 HEPACAM2A8MVW5 462 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 M0R2N6 131 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF263O14978 683 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 EXTL3O43909 919 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 DKC1O60832 514 aaKnown RBP eCLIP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 LRP3O75074 770 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 MOSPD3O75425 235 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 SLITRK3O94933 977 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PROS1P07225 676 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 IFNAR1P17181 557 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PTPN2P17706 415 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 RPS6KB1P23443 525 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PDIA3P30101 505 aaKnown RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ELF1P32519 619 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 ARL2P36404 184 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 CDR1P51861 262 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 SSRP1Q08945 709 aaKnown RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 FOXC1Q12948 553 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 KRT32Q14532 448 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 MXD4Q14582 209 aaPredicted RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 TEAD2Q15562 447 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 EARS2Q5JPH6 523 aaKnown RBP3.89□□□□□ -1.79
PTPRC-213ENST00000529828 STXBP5Q5T5C0 1151 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 STPG1Q5TH74 334 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PKN3Q6P5Z2 889 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 BLOC1S2Q6QNY1 142 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 CD300LGQ6UXG3 332 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 UNQ6494/PRO21346Q6UXR6 183 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 PIK3AP1Q6ZUJ8 805 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 KBTBD6Q86V97 674 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 LONP2Q86WA8 852 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 MAP4K3Q8IVH8 894 aa3.89□□□□□ -1.79
PTPRC-213ENST00000529828 EXOC8Q8IYI6 725 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms