RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 DDX20Q9UHI6 824 aaKnown RBP5.84□□□□□ -1.47
C11orf88-204ENST00000529661 SLC23A1Q9UHI7 598 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 ATP11BQ9Y2G3 1177 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 MAP3K2Q9Y2U5 619 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 PCDHA13Q9Y5I0 950 aa5.84□□□□□ -1.47
C11orf88-204ENST00000529661 FRMPD2Q68DX3 1309 aaPredicted RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 CENPVL1A0A0U1RR11 272 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 HTRA2O43464 458 aaPredicted RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 SLC6A2P23975 617 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 INHBCP55103 352 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 CREMQ03060 361 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 DPTQ07507 201 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 HDAC1Q13547 482 aaPredicted RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 GALEQ14376 348 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 UBXN2BQ14CS0 331 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 UAP1L1Q3KQV9 507 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 OTUD7BQ6GQQ9 843 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 VRK3Q8IV63 474 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 PJA1Q8NG27 643 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 DIS3LQ8TF46 1054 aaKnown RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 HDAC10Q969S8 669 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 CHFRQ96EP1 664 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 MVB12AQ96EY5 273 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 MYEOVQ96EZ4 313 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 TMX3Q96JJ7 454 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 MAP3K14Q99558 947 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 ACO2Q99798 780 aaKnown RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 TTPALQ9BTX7 342 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 CHMP4AQ9BY43 222 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 REXO4Q9GZR2 422 aaKnown RBP5.83□□□□□ -1.48
C11orf88-204ENST00000529661 TDP1Q9NUW8 608 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 FBXO34Q9NWN3 711 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 ANKFY1Q9P2R3 1169 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 FPGT-TNNI3KV9GXZ4 949 aa5.83□□□□□ -1.48
C11orf88-204ENST00000529661 WDR33Q9C0J8 1336 aaKnown RBP5.82□□□□□ -1.48
C11orf88-204ENST00000529661 TCRBV7S2A1N4TA0A589 114 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 UNC119BA6NIH7 251 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 KIAA0391O15091 583 aaKnown RBP5.82□□□□□ -1.48
C11orf88-204ENST00000529661 HLA-DOAP06340 250 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 PHKG2P15735 406 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 FXR1P51114 621 aaKnown RBP eCLIP5.82□□□□□ -1.48
C11orf88-204ENST00000529661 USP14P54578 494 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 FSTL1Q12841 308 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 BIRC2Q13490 618 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 BEAN1Q3B7T3 259 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 AGAP9Q5VTM2 703 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 METRNLQ641Q3 311 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 SEM1Q6ZVN7 128 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 MRGPRGQ86SM5 289 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 LDLRAD3Q86YD5 345 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 RHOT2Q8IXI1 618 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 ZSWIM1Q9BR11 485 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 IKZF4Q9H2S9 585 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 KLHL11Q9NVR0 708 aa5.82□□□□□ -1.48
C11orf88-204ENST00000529661 A0A087X1B8 175 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 CCDC154A6NI56 674 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 H3BML4 177 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 HRGP04196 525 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 KRT4P19013 534 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 DDX6P26196 483 aaKnown RBP eCLIP5.81□□□□□ -1.48
C11orf88-204ENST00000529661 ATP8B2P98198 1209 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 TARDBPQ13148 414 aaKnown RBP eCLIP5.81□□□□□ -1.48
C11orf88-204ENST00000529661 IL10RAQ13651 578 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 PGS1Q32NB8 556 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 C3orf36Q3SXR2 165 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 SYCP2LQ5T4T6 812 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 LAIR1Q6GTX8 287 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 PPP4R4Q6NUP7 873 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 Q6ZPA2 131 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 SRGAP1Q7Z6B7 1085 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 GRAMD1CQ8IYS0 662 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 ULK2Q8IYT8 1036 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 SAMD3Q8N6K7 520 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 TTC17Q96AE7 1141 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 RPS6KC1Q96S38 1066 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 PRRX2Q99811 253 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 HS3ST4Q9Y661 456 aa5.81□□□□□ -1.48
C11orf88-204ENST00000529661 ANO9A1A5B4 782 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 CDHR4A6H8M9 788 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 TMEM191CA6NGB0 347 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 TMEM200CA6NKL6 621 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 TPD52L2O43399 206 aaKnown RBP5.8□□□□□ -1.48
C11orf88-204ENST00000529661 RAMP2O60895 175 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 TUSC2O75896 110 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 PRSS23O95084 383 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 ALAS1P13196 640 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 MXRA7P84157 204 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 CDC42EP1Q00587 391 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 RESTQ13127 1097 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 ATP2B3Q16720 1220 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 MAPKAPK5Q8IW41 473 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 KAT5Q92993 513 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 WDR11Q9BZH6 1224 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 C11orf54Q9H0W9 315 aaPredicted RBP5.8□□□□□ -1.48
C11orf88-204ENST00000529661 GSTO2Q9H4Y5 243 aa5.8□□□□□ -1.48
C11orf88-204ENST00000529661 RIPOR2Q9Y4F9 1068 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms