RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 ADPGKQ9BRR6 497 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 GCOM2Q9BZD3 368 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 ASB7Q9H672 318 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 SIX4Q9UIU6 781 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 GTF3C4Q9UKN8 822 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 MYADML2A6NDP7 307 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 TREHO43280 583 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 MTA2O94776 668 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 CYP1A2P05177 515 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 GNA15P30679 374 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 ZNF200P98182 395 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 OSMRQ99650 979 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 KATNAL1Q9BW62 490 aa16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-213ENST00000529611 ALDH1A1P00352 501 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 CYP1A1P04798 512 aaPredicted RBP16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 HOXC8P31273 242 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 FLT3LGP49771 235 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 MMGT1Q8N4V1 131 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 CXorf38Q8TB03 319 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 ZNF653Q96CK0 615 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 CALR3Q96L12 384 aaKnown RBP16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 AMFRQ9UKV5 643 aa16.52■□□□□ 0.24
CCDC90B-213ENST00000529611 MROH7Q68CQ1 1323 aa16.52■□□□□ 0.23
CCDC90B-213ENST00000529611 CCDC151A5D8V7 595 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CFHP08603 1231 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 DARSP14868 501 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 ASPAP45381 313 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 C11orf63Q6NUN7 778 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CATSPER4Q7RTX7 472 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 PBKQ96KB5 322 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 PDCL3Q9H2J4 239 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CISHQ9NSE2 258 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CITO14578 2027 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 KRT19P08727 400 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 C6orf222P0C671 652 aaPredicted RBP16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CD58P19256 250 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 GRM5P41594 1212 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 VSNL1P62760 191 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CAP1Q01518 475 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CENPCQ03188 943 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 BRD3Q15059 726 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 DCAF4L1Q3SXM0 396 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 MFSD14CQ5VZR4 134 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 SCARA5Q6ZMJ2 495 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CPA5Q8WXQ8 436 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 CYFIP2Q96F07 1278 aa16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 RBM12Q9NTZ6 932 aaKnown RBP16.51■□□□□ 0.23
CCDC90B-213ENST00000529611 C17orf102A2RUQ5 167 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 NPTXRO95502 500 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 ITGB3P05106 788 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 WEE2P0C1S8 567 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 EIF4BP23588 611 aaKnown RBP16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 GJA9P57773 515 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 PRKCZQ05513 592 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 NOGQ13253 232 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 PCBP1Q15365 356 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 NAA35Q5VZE5 725 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 MCOLN2Q8IZK6 566 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 ZNF564Q8TBZ8 553 aaPredicted RBP16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 TMEM40Q8WWA1 233 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 NUP85Q9BW27 656 aa16.5■□□□□ 0.23
CCDC90B-213ENST00000529611 TARSL2A2RTX5 802 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 DDX3YO15523 660 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 THAP12O43422 761 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 AOC2O75106 756 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 ZRANB2O95218 330 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 NOMO3P69849 1222 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 TMEM132DQ14C87 1099 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 WDR93Q6P2C0 686 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 SLC27A1Q6PCB7 646 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 TRIM72Q6ZMU5 477 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 C7orf31Q8N865 590 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 UVRAGQ9P2Y5 699 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 CNOT8Q9UFF9 292 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 POLIQ9UNA4 740 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 C2CD2Q9Y426 696 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 ALG6Q9Y672 507 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 TUBBP07437 444 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 RNASE9P60153 205 aaKnown RBP16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 TRIM32Q13049 653 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 SNX17Q15036 470 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 ZNF667Q5HYK9 610 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 GNASQ5JWF2 1037 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 MON1BQ7L1V2 547 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
CCDC90B-213ENST00000529611 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms