RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 SOX9P48436 509 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 CLCNKBP51801 687 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 PON2Q15165 354 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 DAGLBQ8NCG7 672 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 DYDC2Q96IM9 177 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 SLC26A6Q9BXS9 759 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 AFF4Q9UHB7 1163 aaKnown RBP12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 TPCN1Q9ULQ1 816 aa12.82□□□□□ -0.36
AMBRA1-207ENST00000529553 DSPP15924 2871 aaKnown RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 FAM221BA6H8Z2 402 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TOP3BO95985 862 aaKnown RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 MYL4P12829 197 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 IGFBP6P24592 240 aaPredicted RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 WEE1P30291 646 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 HOXC13P31276 330 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 PXNP49023 591 aaPredicted RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 KARSQ15046 597 aaKnown RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TEAD2Q15562 447 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TCEAL6Q6IPX3 200 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TPH2Q8IWU9 490 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 HAS1Q92839 578 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TCEAL3Q969E4 200 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 RSPRY1Q96DX4 576 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 NAP1L4Q99733 375 aaKnown RBP12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 ADPGKQ9BRR6 497 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 CXCL16Q9H2A7 254 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 SLITRK6Q9H5Y7 841 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 NCANO14594 1321 aa12.81□□□□□ -0.36
AMBRA1-207ENST00000529553 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 BRCC3P46736 316 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 ARPP19P56211 112 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 CREB5Q02930 508 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 TWF1Q12792 350 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 ADCK5Q3MIX3 580 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 C11orf74Q86VG3 221 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 ZBTB8OSQ8IWT0 167 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 SLFN12Q8IYM2 578 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 SHKBP1Q8TBC3 707 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 HSD17B14Q9BPX1 270 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 GTSE1Q9NYZ3 720 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 ANKFY1Q9P2R3 1169 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 EBF1Q9UH73 591 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 WDFY3Q8IZQ1 3526 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 DMXL2Q8TDJ6 3036 aa12.8□□□□□ -0.36
AMBRA1-207ENST00000529553 LNP1A1A4G5 178 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 LRRIQ4A6NIV6 560 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 H0Y626 953 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 ACKR2O00590 384 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 DPYSL4O14531 572 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 MARCH6O60337 910 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 TRIM16O95361 564 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 BAG4O95429 457 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 FGF19O95750 216 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 GJA1P17302 382 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 GRSF1Q12849 480 aaKnown RBP eCLIP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 INF2Q27J81 1249 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 ITPRIPL2Q3MIP1 535 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 DCAF4L1Q3SXM0 396 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 SOWAHCQ53LP3 525 aaPredicted RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 TMEM196Q5HYL7 178 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 NCAPH2Q6IBW4 605 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 C3orf58Q8NDZ4 430 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 BRF1Q92994 677 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 LRRC3Q9BY71 257 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 SLC32A1Q9H598 525 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 SLC38A7Q9NVC3 462 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 NBEAQ8NFP9 2946 aa12.79□□□□□ -0.36
AMBRA1-207ENST00000529553 SMIM28A0A1B0GU29 152 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 TTLL13PA6NNM8 815 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 I3L4J1 428 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 TRDMT1O14717 391 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 CAPNS1P04632 268 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 RDXP35241 583 aaKnown RBP12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 RARRES1P49788 294 aa12.78□□□□□ -0.36
AMBRA1-207ENST00000529553 AMPD2Q01433 879 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms