RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 DTX3LQ8TDB6 740 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TMA16Q96EY4 203 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 NAF1Q96HR8 494 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 KLF6Q99612 283 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SEPT5Q99719 369 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SMARCAD1Q9H4L7 1026 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SLC24A3Q9HC58 644 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 NYAP2Q9P242 653 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 UNC13BO14795 1591 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 CHUKO15111 745 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 MYO1DO94832 1006 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 HOXD10P28358 340 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 GTF2H1P32780 548 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 DAB2P98082 770 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 FLOT2Q14254 428 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 DDX42Q86XP3 938 aaKnown RBP eCLIP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 RAET1EQ8TD07 263 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ARHGEF26Q96DR7 871 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 MXRA8Q9BRK3 442 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TSSK1BQ9BXA7 367 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 MOV10L1Q9BXT6 1211 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 UVRAGQ9P2Y5 699 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 PDS5AQ29RF7 1337 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 C3orf70A6NLC5 250 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 NTSR2O95665 410 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 C6orf222P0C671 652 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SF3B3Q15393 1217 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 LRRC36Q1X8D7 754 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SEZ6Q53EL9 994 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TEDDM1Q5T9Z0 273 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ATF7IP2Q5U623 682 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 EFCAB12Q6NXP0 572 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 TTC23LQ6PF05 361 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 LONP2Q86WA8 852 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 ASAP3Q8TDY4 903 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 OTULINQ96BN8 352 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 PABPC5Q96DU9 382 aaKnown RBP8.54□□□□□ -1.04
CTNND1-220ENST00000529526 EPN3Q9H201 632 aa8.54□□□□□ -1.04
CTNND1-220ENST00000529526 SERPIND1P05546 499 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 NBPF9Q3BBW0 867 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 LRRC23Q53EV4 343 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 SYDE1Q6ZW31 735 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 CDR2LQ86X02 465 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TAGAPQ8N103 731 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 DACH2Q96NX9 599 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TRIM54Q9BYV2 358 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 STX18Q9P2W9 335 aaKnown RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ZNF212Q9UDV6 495 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 KDM6AO15550 1401 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 SLC37A4O43826 429 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 AGTP01019 485 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 GH1P01241 217 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 CYP2B6P20813 491 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ETFBP38117 255 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 OCA2Q04671 838 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ORC1Q13415 861 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 HIC1Q14526 733 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 USP10Q14694 798 aaKnown RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 SPDYAQ5MJ70 313 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 IL31Q6EBC2 164 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 SEPT1Q8WYJ6 367 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 NR1H4Q96RI1 486 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 YY1AP1Q9H869 796 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 DYRK4Q9NR20 520 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 GGA3Q9NZ52 723 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 EHD2Q9NZN4 543 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ASMTLO95671 621 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 KCNJ1P48048 391 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ITPK1Q13572 414 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PIGHQ14442 188 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 AMHR2Q16671 573 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 GRAMD4Q6IC98 578 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ANO5Q75V66 913 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 LPAR1Q92633 364 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PTPRN2Q92932 1015 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 DCUN1D1Q96GG9 259 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TAAR1Q96RJ0 339 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 EIF2AQ9BY44 585 aaKnown RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TASP1Q9H6P5 420 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 VCPKMTQ9H867 229 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ARHGEF38Q9NXL2 777 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 NPEPPSP55786 919 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 PTK7Q13308 1070 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 BYSLQ13895 437 aaKnown RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 CYTH1Q15438 398 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 ZC3H12BQ5HYM0 836 aaKnown RBP8.53□□□□□ -1.04
CTNND1-220ENST00000529526 JAMLQ86YT9 394 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 MUC3BQ9H195 1237 aa8.53□□□□□ -1.04
CTNND1-220ENST00000529526 TUBE1Q9UJT0 475 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms