RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 ZNF18P17022 549 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 RBP5P82980 135 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 PPP3CAQ08209 521 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 SV2AQ7L0J3 742 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 GPR65Q8IYL9 337 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 FAM200AQ8TCP9 573 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 PAAF1Q9BRP4 392 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 C11orf84Q9BUA3 381 aaPredicted RBP15.54■□□□□ 0.08
UBXN1-209ENST00000528907 HSD3B7Q9H2F3 369 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 VRTNQ9H8Y1 702 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 SAMSN1Q9NSI8 373 aaKnown RBP15.54■□□□□ 0.08
UBXN1-209ENST00000528907 FANCLQ9NW38 375 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 SIX4Q9UIU6 781 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 ADAM28Q9UKQ2 775 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 COQ4Q9Y3A0 265 aa15.54■□□□□ 0.08
UBXN1-209ENST00000528907 COL4A4P53420 1690 aaPredicted RBP15.54■□□□□ 0.08
UBXN1-209ENST00000528907 LAMA2P24043 3122 aaKnown RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 LRRC10BA6NIK2 292 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 N4BP1O75113 896 aaKnown RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 FGF18O76093 207 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 KIF4AO95239 1232 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 ITGB3P05106 788 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 ATICP31939 592 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 CTNNB1P35222 781 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 KRT17Q04695 432 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 ELAVL2Q12926 359 aaKnown RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 TCP11X2Q5H9J9 407 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 TDRD10Q5VZ19 366 aaKnown RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 KRT39Q6A163 491 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 DDX53Q86TM3 631 aaKnown RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 AOPEPQ8N6M6 819 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 KLHL23Q8NBE8 558 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 C3orf58Q8NDZ4 430 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 FBXO22Q8NEZ5 403 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 MAFAQ8NHW3 353 aaPredicted RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 FAXDC2Q96IV6 333 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 ZNF560Q96MR9 790 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 LMAN2LQ9H0V9 348 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 TSPY26PQ9H489 355 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 ZNF576Q9H609 170 aa15.53■□□□□ 0.08
UBXN1-209ENST00000528907 MAGEC2Q9UBF1 373 aaPredicted RBP15.53■□□□□ 0.08
UBXN1-209ENST00000528907 KCNJ18B7U540 433 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TRAPPC3O43617 180 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 B3GAT3O94766 335 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 CST3P01034 146 aaPredicted RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TRIM49P0CI25 452 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TRIM49CP0CI26 452 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TAF6P49848 677 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 GUCY2FP51841 1108 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 KCNJ12Q14500 433 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 MAN2A1Q16706 1144 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 LMBRD2Q68DH5 695 aaPredicted RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TMEM173Q86WV6 379 aaPredicted RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 SPPL3Q8TCT6 385 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 BCL7CQ8WUZ0 217 aaPredicted RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TAF4BQ92750 862 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 TMEM169Q96HH4 297 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 CDX2Q99626 313 aaPredicted RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 CBX8Q9HC52 389 aa15.52■□□□□ 0.08
UBXN1-209ENST00000528907 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 PRG3Q9Y2Y8 225 aaPredicted RBP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.08
UBXN1-209ENST00000528907 EYSQ5T1H1 3165 aa15.52■□□□□ 0.07
UBXN1-209ENST00000528907 SCN1AP35498 2009 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 SF3B1O75533 1304 aaKnown RBP eCLIP15.51■□□□□ 0.07
UBXN1-209ENST00000528907 GTPBP10A4D1E9 387 aaKnown RBP15.51■□□□□ 0.07
UBXN1-209ENST00000528907 BECN2A8MW95 431 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 NT5C1B-RDH14C9J2C7 533 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 M0QZQ0 153 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 TADA2AO75478 443 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 VNN1O95497 513 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 ITGB1P05556 798 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 FAM163BP0C2L3 166 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 POLR2BP30876 1174 aaKnown RBP15.51■□□□□ 0.07
UBXN1-209ENST00000528907 PBX3P40426 434 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 GCLMP48507 274 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 FMO5P49326 533 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 MXI1P50539 228 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 LILRA4P59901 499 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 KCNH2Q12809 1159 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 SV2CQ496J9 727 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 DCAF17Q5H9S7 520 aaPredicted RBP15.51■□□□□ 0.07
UBXN1-209ENST00000528907 TCERG1LQ5VWI1 586 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 FUT10Q6P4F1 479 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 SPRED2Q7Z698 418 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 SUSD3Q96L08 255 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 TUBGCP2Q9BSJ2 902 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 HERC2P3Q9BVR0 1158 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
UBXN1-209ENST00000528907 CHST7Q9NS84 486 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 GDAP2Q9NXN4 497 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 CACNG4Q9UBN1 327 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 PUF60Q9UHX1 559 aaKnown RBP15.51■□□□□ 0.07
UBXN1-209ENST00000528907 AGAP1Q9UPQ3 857 aa15.51■□□□□ 0.07
UBXN1-209ENST00000528907 ARHGEF37A1IGU5 675 aa15.5■□□□□ 0.07
UBXN1-209ENST00000528907 PPEF2O14830 753 aa15.5■□□□□ 0.07
UBXN1-209ENST00000528907 SYN3O14994 580 aa15.5■□□□□ 0.07
UBXN1-209ENST00000528907 AFPP02771 609 aaKnown RBP15.5■□□□□ 0.07
UBXN1-209ENST00000528907 SOD2P04179 222 aa15.5■□□□□ 0.07
UBXN1-209ENST00000528907 POU3F3P20264 500 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms