RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DSTYKQ6XUX3 929 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 HFE2Q6ZVN8 426 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 GET4Q7L5D6 327 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-213ENST00000527897 ZDHHC14Q8IZN3 488 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 SAAL1Q96ER3 474 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 CUEDC2Q9H467 287 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 WDR6Q9NNW5 1121 aaKnown RBP16.87■□□□□ 0.29
CAPN1-213ENST00000527897 OLFML3Q9NRN5 406 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 TIMM13Q9Y5L4 95 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-213ENST00000527897 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 TECTAO75443 2155 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 ANK1P16157 1881 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 DOCK6Q96HP0 2047 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 H7C4K7 107 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 C1RP00736 705 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 ELF1P32519 619 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 NTHL1P78549 312 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 MTMR3Q13615 1198 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 POSTNQ15063 836 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 ZBTB6Q15916 424 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 CYP26C1Q6V0L0 522 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 GRASPQ7Z6J2 395 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-213ENST00000527897 CD302Q8IX05 232 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 PBXIP1Q96AQ6 731 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 CHAMP1Q96JM3 812 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 STRA6Q9BX79 667 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 TRIM9Q9C026 710 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 SMOC2Q9H3U7 446 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 PCIF1Q9H4Z3 704 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 KBTBD4Q9NVX7 518 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 SORCS3Q9UPU3 1222 aa16.86■□□□□ 0.29
CAPN1-213ENST00000527897 FRMD3A2A2Y4 597 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 PPEF2O14830 753 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 N4BP1O75113 896 aaKnown RBP16.85■□□□□ 0.29
CAPN1-213ENST00000527897 XYLBO75191 536 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 CYP3A5P20815 502 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 CASP1P29466 404 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 ADSSP30520 456 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 LRPAP1P30533 357 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 AFMP43652 599 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 ROR1Q01973 937 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 SIGLEC14Q08ET2 396 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 ALCAMQ13740 583 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 SPATA1Q5VX52 437 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 GLIS3Q8NEA6 775 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 BLZF1Q9H2G9 400 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 FBXL5Q9UKA1 691 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 PCDHB8Q9UN66 801 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 STYXL1Q9Y6J8 313 aa16.85■□□□□ 0.29
CAPN1-213ENST00000527897 WDR27A2RRH5 827 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 PRRG1O14668 218 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 HNRNPA1P09651 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
CAPN1-213ENST00000527897 CPB1P15086 417 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 RESP18Q5W5W9 173 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 ARMCX5Q6P1M9 558 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 STXBP4Q6ZWJ1 553 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 USP37Q86T82 979 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 ZSWIM2Q8NEG5 633 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-213ENST00000527897 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 MYADMQ96S97 322 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 ASB7Q9H672 318 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 CYP4F11Q9HBI6 524 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
CAPN1-213ENST00000527897 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-213ENST00000527897 ADRB2P07550 413 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 FSHRP23945 695 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 KRT85P78386 507 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 YWHAHQ04917 246 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-213ENST00000527897 C9orf57Q5W0N0 161 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 SLC8B1Q6J4K2 584 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-213ENST00000527897 GRAMD1CQ8IYS0 662 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 ZNF461Q8TAF7 563 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 MFSD14AQ96MC6 490 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 TSPAN18Q96SJ8 248 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 CBWD1Q9BRT8 395 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 RHOBTB2Q9BYZ6 727 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 TMEM206Q9H813 350 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 MAGEF1Q9HAY2 307 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 HCFC1R1Q9NWW0 138 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 DPP3Q9NY33 737 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-213ENST00000527897 KCNH3Q9ULD8 1083 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 DERAQ9Y315 318 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
CAPN1-213ENST00000527897 TCHHQ07283 1943 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 M0QZQ0 153 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 IL18RAPO95256 599 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 LRG1P02750 347 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 GARTP22102 1010 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 HOXA9P31269 272 aa16.82■□□□□ 0.28
CAPN1-213ENST00000527897 TFAMQ00059 246 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms