RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 A0A0G2JLL6 359 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 GOLGA6CA6NDK9 693 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 GOLGA6BA6NDN3 693 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 BIN1O00499 593 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CTAGE5O15320 804 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 ZEB2O60315 1214 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 KCNH1O95259 989 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 KRT18P05783 430 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 GOLGA6DP0CG33 693 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CCDC192P0DO97 292 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 ITGA4P13612 1032 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 ELNP15502 786 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CASP1P29466 404 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 LONP1P36776 959 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 FLT3P36888 993 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 SREBF1P36956 1147 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 PRPHP41219 470 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 TECP42680 631 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 AFMP43652 599 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 ID4P47928 161 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 MRE11P49959 708 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 RAC1P63000 192 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 TMPRSS15P98073 1019 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CYP4F3Q08477 520 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 PPIL2Q13356 520 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 ORC2Q13416 577 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 PLS1Q14651 629 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 KARSQ15046 597 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 PRR16Q569H4 304 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 SLC35F1Q5T1Q4 408 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 FAM102BQ5T8I3 360 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 NXNQ6DKJ4 435 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 ISM2Q6H9L7 571 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 SNRNP48Q6IEG0 339 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 SASS6Q6UVJ0 657 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 SLC30A10Q6XR72 485 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 C11orf57Q6ZUT1 292 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 GET4Q7L5D6 327 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 MAMDC2Q7Z304 686 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 PRRT2Q7Z6L0 340 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 ZBTB46Q86UZ6 589 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 PASD1Q8IV76 773 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 TCEAL8Q8IYN2 117 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CNNM3Q8NE01 707 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 REPS2Q8NFH8 660 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 RASSF8Q8NHQ8 419 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 IL31RAQ8NI17 732 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CYP2W1Q8TAV3 490 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 LRRC15Q8TF66 581 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 CRYGNQ8WXF5 182 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 KCTD13Q8WZ19 329 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 STAMQ92783 540 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 HAS1Q92839 578 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 USP7Q93009 1102 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 OPTNQ96CV9 577 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 C1orf159Q96HA4 380 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 MAGEB10Q96LZ2 347 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 TIGD1Q96MW7 591 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 NAP1L4Q99733 375 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 ORAI3Q9BRQ5 295 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 NKX2-4Q9H2Z4 354 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 GSX1Q9H4S2 264 aaPredicted RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 CRTAC1Q9NQ79 661 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 RNF146Q9NTX7 359 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 GOLGA6AQ9NYA3 693 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 COL20A1Q9P218 1284 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 AP4E1Q9UPM8 1137 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 APOBEC2Q9Y235 224 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 RIPK3Q9Y572 518 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 PASKQ96RG2 1323 aa4.62□□□□□ -1.67
CD44-226ENST00000527889 TDRD15B5MCY1 1934 aaKnown RBP4.62□□□□□ -1.67
CD44-226ENST00000527889 LAMA2P24043 3122 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 MEGF11A6BM72 1044 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 FAM86B1E9PN63 330 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 LAD1O00515 517 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 RRP9O43818 475 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 ABLIM3O94929 683 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 CELF2O95319 508 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 WISP1O95388 367 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 CRTAMO95727 393 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 FOSP01100 380 aaPredicted RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 SCG5P05408 212 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 MYL1P05976 194 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 FAM86B2P0C5J1 330 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 ADH5P11766 374 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 GCFC2P16383 781 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 HOXC12P31275 282 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 UBA7P41226 1012 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 STAT6P42226 847 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 SSR1P43307 286 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 HSD17B4P51659 736 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 USP11P51784 963 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 RPS6P62753 249 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 RNF4P78317 190 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 PPATQ06203 517 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 TRAF1Q13077 416 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 GRB10Q13322 594 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 MOGSQ13724 837 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 DHX8Q14562 1220 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 COG2Q14746 738 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms