RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 SPTLC1O15269 473 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 TMEM191BP0C7N4 346 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 POLR2BP30876 1174 aaKnown RBP17.98■□□□□ 0.47
SMCO4-204ENST00000527149 IRS1P35568 1242 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 VAMP7P51809 220 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 MARSP56192 900 aaKnown RBP17.98■□□□□ 0.47
SMCO4-204ENST00000527149 ERVFC1P60507 584 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 DUOXA2Q1HG44 320 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 ZSCAN23Q3MJ62 389 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 TAS1R1Q7RTX1 841 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 FILIP1Q7Z7B0 1213 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 MYLIPQ8WY64 445 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 MRPL38Q96DV4 380 aaKnown RBP17.98■□□□□ 0.47
SMCO4-204ENST00000527149 FNBP1Q96RU3 617 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 ITGA11Q9UKX5 1188 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
SMCO4-204ENST00000527149 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMCO4-204ENST00000527149 SYCE3A1L190 88 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 SOD2P04179 222 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 ITGB3P05106 788 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 TNNI1P19237 187 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 BRCC3P46736 316 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 KRT17Q04695 432 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 PPP3CAQ08209 521 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 TDRD10Q5VZ19 366 aaKnown RBP17.97■□□□□ 0.47
SMCO4-204ENST00000527149 TRAPPC11Q7Z392 1133 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 VPS52Q8N1B4 723 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 CACTINQ8WUQ7 758 aaKnown RBP17.97■□□□□ 0.47
SMCO4-204ENST00000527149 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 SRRTQ9BXP5 876 aaKnown RBP17.97■□□□□ 0.47
SMCO4-204ENST00000527149 DNAJC25Q9H1X3 360 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 TLR9Q9NR96 1032 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 CHST7Q9NS84 486 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 LMCD1Q9NZU5 365 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 MTCH2Q9Y6C9 303 aa17.97■□□□□ 0.47
SMCO4-204ENST00000527149 XIRP2A4UGR9 3374 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 I3L4J1 428 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 IKBKBO14920 756 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 LILRB3O75022 631 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 TADA2AO75478 443 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
SMCO4-204ENST00000527149 CTSAP10619 480 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 FGFR3P22607 806 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 LILRA4P59901 499 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 ZACNQ401N2 412 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 TIGD5Q53EQ6 642 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 RTP2Q5QGT7 225 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 FRMD5Q7Z6J6 570 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 TRIM59Q8IWR1 403 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 LRRC52Q8N7C0 313 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 SLC35C1Q96A29 364 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 SUSD3Q96L08 255 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 B3GALT6Q96L58 329 aa17.96■□□□□ 0.47
SMCO4-204ENST00000527149 ARMCX3Q9UH62 379 aaPredicted RBP17.96■□□□□ 0.47
SMCO4-204ENST00000527149 LETM1O95202 739 aaPredicted RBP17.95■□□□□ 0.46
SMCO4-204ENST00000527149 VNN1O95497 513 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 TNNC2P02585 160 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 KRT13P13646 458 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 AP3M2P53677 418 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 DSG1Q02413 1049 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 ELAVL2Q12926 359 aaKnown RBP17.95■□□□□ 0.46
SMCO4-204ENST00000527149 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 ENOX1Q8TC92 643 aaKnown RBP17.95■□□□□ 0.46
SMCO4-204ENST00000527149 AUTS2Q8WXX7 1259 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 TCF25Q9BQ70 676 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 XYLT2Q9H1B5 865 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 STK39Q9UEW8 545 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 PUF60Q9UHX1 559 aaKnown RBP17.95■□□□□ 0.46
SMCO4-204ENST00000527149 AGAP1Q9UPQ3 857 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 IRAK3Q9Y616 596 aa17.95■□□□□ 0.46
SMCO4-204ENST00000527149 HIDE1A8MVS5 230 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 M0QZQ0 153 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 CSPG5O95196 566 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 CCDC192P0DO97 292 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
SMCO4-204ENST00000527149 TAF6P49848 677 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 RBP5P82980 135 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 NCAPHQ15003 741 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 PTPROQ16827 1216 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 FAM171A1Q5VUB5 890 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 KIAA0319Q5VV43 1072 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-204ENST00000527149 USP37Q86T82 979 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 GPR65Q8IYL9 337 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 CNOT6LQ96LI5 555 aaKnown RBP17.94■□□□□ 0.46
SMCO4-204ENST00000527149 ZNF560Q96MR9 790 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 GAS2L1Q99501 681 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-204ENST00000527149 METTL14Q9HCE5 456 aaKnown RBP17.94■□□□□ 0.46
SMCO4-204ENST00000527149 NUB1Q9Y5A7 615 aa17.94■□□□□ 0.46
SMCO4-204ENST00000527149 SYN3O14994 580 aa17.93■□□□□ 0.46
SMCO4-204ENST00000527149 STAU1O95793 577 aaKnown RBP17.93■□□□□ 0.46
SMCO4-204ENST00000527149 GNA14O95837 355 aa17.93■□□□□ 0.46
SMCO4-204ENST00000527149 CST3P01034 146 aaPredicted RBP17.93■□□□□ 0.46
SMCO4-204ENST00000527149 GTF2H1P32780 548 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms